RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SOBPA7XYQ1 873 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 CSH1P0DML2 217 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 CSH2P0DML3 217 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 DDX6P26196 483 aaKnown RBP eCLIP15.42■□□□□ 0.06
MBD1-220ENST00000589758 PCSK1P29120 753 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 ME1P48163 572 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 CYP4F8P98187 520 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 PLCB2Q00722 1185 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 MTAPQ13126 283 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 DUOXA2Q1HG44 320 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 INTS6LQ5JSJ4 861 aaKnown RBP15.42■□□□□ 0.06
MBD1-220ENST00000589758 EPM2AIP1Q7L775 607 aaPredicted RBP15.42■□□□□ 0.06
MBD1-220ENST00000589758 WDR49Q8IV35 697 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 BPIFB1Q8TDL5 484 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 ATRIPQ8WXE1 791 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 HPS3Q969F9 1004 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 PI4K2AQ9BTU6 479 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 MTMR12Q9C0I1 747 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
MBD1-220ENST00000589758 THG1LQ9NWX6 298 aaKnown RBP15.42■□□□□ 0.06
MBD1-220ENST00000589758 ZSCAN32Q9NX65 697 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 UXTQ9UBK9 157 aaPredicted RBP15.42■□□□□ 0.06
MBD1-220ENST00000589758 SIX4Q9UIU6 781 aa15.42■□□□□ 0.06
MBD1-220ENST00000589758 GABRDO14764 452 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
MBD1-220ENST00000589758 HMGA1P17096 107 aaKnown RBP15.41■□□□□ 0.06
MBD1-220ENST00000589758 CCNE1P24864 410 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 HOXD13P35453 343 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 CDR1P51861 262 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
MBD1-220ENST00000589758 KRT85P78386 507 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 NUCB2P80303 420 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 RALGPS2Q86X27 583 aaPredicted RBP15.41■□□□□ 0.06
MBD1-220ENST00000589758 CBWD2Q8IUF1 395 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 ADGRF2Q8IZF7 708 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 CELF5Q8N6W0 485 aaKnown RBP15.41■□□□□ 0.06
MBD1-220ENST00000589758 SUMF1Q8NBK3 374 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 RUBCNQ92622 972 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 NELL1Q92832 810 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 SLC46A2Q9BY10 475 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 TMLHEQ9NVH6 421 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 ATP6V1DQ9Y5K8 247 aa15.41■□□□□ 0.06
MBD1-220ENST00000589758 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 MYBPHLA2RUH7 354 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 SLC38A8A6NNN8 435 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 LILRB5O75023 590 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 F11P03951 625 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 CHRNB1P11230 501 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 ACAT1P24752 427 aaKnown RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 AVPR1AP37288 418 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 CCR3P51677 355 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 NRLP54845 237 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 NLRP12P59046 1061 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 LRRC32Q14392 662 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 CFAP221Q4G0U5 840 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 DGKKQ5KSL6 1271 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 LMBRD2Q68DH5 695 aaPredicted RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 HS2ST1Q7LGA3 356 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 SPATA2LQ8IUW3 424 aaPredicted RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 GPIHBP1Q8IV16 184 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 OR5B17Q8NGF7 314 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 FUBP3Q96I24 572 aaKnown RBP eCLIP15.4■□□□□ 0.06
MBD1-220ENST00000589758 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 LRRC3BQ96PB8 259 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 PKMYT1Q99640 499 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 HINFPQ9BQA5 517 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 AGPAT3Q9NRZ7 376 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 RCOR1Q9UKL0 485 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 GTF3C4Q9UKN8 822 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 PCDHA7Q9UN72 937 aa15.4■□□□□ 0.06
MBD1-220ENST00000589758 MAGED2Q9UNF1 606 aaPredicted RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 PTPRZ1P23471 2315 aaPredicted RBP15.4■□□□□ 0.06
MBD1-220ENST00000589758 FAM186AA6NE01 2351 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 SPECC1L-ADORA2AF8WAN1 911 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 TGFB1I1O43294 461 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 NOL4O94818 638 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 PRAMEF12O95522 483 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 CYP2F1P24903 491 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 CTHP32929 405 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 EHHADHQ08426 723 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
MBD1-220ENST00000589758 SNRNP35Q16560 246 aaKnown RBP15.39■□□□□ 0.05
MBD1-220ENST00000589758 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 SCARA3Q6AZY7 606 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 C4orf50Q6ZRC1 276 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 LIMS2Q7Z4I7 341 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 TMEM150AQ86TG1 271 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 XXYLT1Q8NBI6 393 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
MBD1-220ENST00000589758 FAM84AQ96KN4 292 aa15.39■□□□□ 0.05
MBD1-220ENST00000589758 FNBP1Q96RU3 617 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms