RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 RMDN2Q96LZ7 410 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 C16orf45Q96MC5 204 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 ZNF396Q96N95 335 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 PTPN18Q99952 460 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 STK31Q9BXU1 1019 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 B3GNT5Q9BYG0 378 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MAF1Q9H063 256 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 RNF32Q9H0A6 362 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 BCAS3Q9H6U6 928 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MYOZ2Q9NPC6 264 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 NLRC4Q9NPP4 1024 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MBNL3Q9NUK0 354 aaKnown RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 FTSJ1Q9UET6 329 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SYNPO2Q9UMS6 1093 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 L1RE1Q9UN81 338 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 ANGEL1Q9UNK9 670 aaKnown RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 YBX2Q9Y2T7 364 aaKnown RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 UBN2Q6ZU65 1347 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SYNRGQ9UMZ2 1314 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 ZNF646O15015 1829 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 TAF1P21675 1872 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 A0A0A6YYJ9 748 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 EFCAB8A8MWE9 144 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ERVV-1B6SEH8 477 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 PQBP1O60828 265 aaKnown RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 FARP2O94887 1054 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 TUBBP07437 444 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 GJB1P08034 283 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SNRPA1P09661 255 aaKnown RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 CASTP20810 708 aaKnown RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 APEX1P27695 318 aaKnown RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 STAT5AP42229 794 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 MAP3K12Q12852 859 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SEMA5AQ13591 1074 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 PLCL1Q15111 1095 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 CR1LQ2VPA4 569 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 GRAMD1BQ3KR37 738 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 C3orf36Q3SXR2 165 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 CCDC178Q5BJE1 867 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SLC10A5Q5PT55 438 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ADGRF1Q5T601 910 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 KLHL10Q6JEL2 608 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ZSCAN25Q6NSZ9 544 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 KLHDC10Q6PID8 442 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 BTNL9Q6UXG8 535 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ETV3LQ6ZN32 361 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 GAREM2Q75VX8 874 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 APLFQ8IW19 511 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 FAM186BQ8IYM0 893 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ENAHQ8N8S7 591 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 MAB21L3Q8N8X9 362 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ABHD4Q8TB40 342 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 IGDCC4Q8TDY8 1250 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 N4BP2L2Q92802 583 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SAAL1Q96ER3 474 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 DTNBP1Q96EV8 351 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 PLEKHG4BQ96PX9 1271 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 MYD88Q99836 296 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 LRFN3Q9BTN0 628 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 BTBD2Q9BX70 525 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 GREM2Q9H772 168 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 NGRNQ9NPE2 291 aaKnown RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 PDRG1Q9NUG6 133 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 CWC25Q9NXE8 425 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-208ENST00000589706 RBPJLQ9UBG7 517 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 POLLQ9UGP5 575 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SCOCQ9UIL1 159 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 BLOC1S6Q9UL45 172 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 WASF3Q9UPY6 502 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 PCDHGB6Q9Y5F9 930 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 DUOX1Q9NRD9 1551 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 NUP98P52948 1817 aa6.38□□□□□ -1.39
SMAD4-208ENST00000589706 SIPA1L3O60292 1781 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 IRS2Q9Y4H2 1338 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 FAM163BP0C2L3 166 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 CCL5P13501 91 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 GSPT1P15170 499 aaKnown RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 XPAP23025 273 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 HTR1BP28222 390 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 SSTR4P31391 388 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 MCAMP43121 646 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 AGFG1P52594 562 aaKnown RBP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 NKX3-2P78367 333 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 TMEM62Q0P6H9 643 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 NFATC3Q12968 1075 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 G3BP1Q13283 466 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMAD4-208ENST00000589706 GRAPQ13588 217 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 PLCB4Q15147 1175 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 LONRF1Q17RB8 773 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 TUBB8Q3ZCM7 444 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 ANO6Q4KMQ2 910 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 HHATQ5VTY9 493 aa6.37□□□□□ -1.39
SMAD4-208ENST00000589706 VASNQ6EMK4 673 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms