RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NAP1L2Q9ULW6 460 aaPredicted RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 BTBD3Q9Y2F9 522 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 TLN1Q9Y490 2541 aaKnown RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 CREBBPQ92793 2442 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 A0A1W2PQD8 194 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 GOLGA8CPA6NN73 597 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 E9PAM4 449 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 AP5Z1O43299 807 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 OAZ2O95190 189 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 LARGE1O95461 756 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 FGF19O95750 216 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 NEK4P51957 841 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 CLDN6P56747 220 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 CXADRP78310 365 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 AMPD2Q01433 879 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 BNC1Q01954 994 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 SEMG2Q02383 582 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 SCRN1Q12765 414 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 CTTNQ14247 550 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 PDGFRLQ15198 375 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 EML3Q32P44 896 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 PLEKHG6Q3KR16 790 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 TAF1BQ53T94 588 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 LMBRD2Q68DH5 695 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 CPLX2Q6PUV4 134 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 DBX2Q6ZNG2 339 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 RABEPKQ7Z6M1 372 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 HSCBQ8IWL3 235 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 CPA6Q8N4T0 437 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 MAB21L3Q8N8X9 362 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 TXNDC5Q8NBS9 432 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 ATAD1Q8NBU5 361 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 SNIP1Q8TAD8 396 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 TTC9Q92623 222 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 C18orf25Q96B23 403 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 NXPE2Q96DL1 559 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 WBP1Q96G27 269 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 PI4K2AQ9BTU6 479 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 TRIM4Q9C037 500 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 POLR3FQ9H1D9 316 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 PRDM16Q9HAZ2 1276 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 CD93Q9NPY3 652 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 GPRC5CQ9NQ84 441 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 PDRG1Q9NUG6 133 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 TDP1Q9NUW8 608 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 PRMT7Q9NVM4 692 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 FNDC3AQ9Y2H6 1198 aaKnown RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 ASB3Q9Y575 518 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 TIMM13Q9Y5L4 95 aaPredicted RBP6.65□□□□□ -1.34
VPS25-204ENST00000589577 SNX14Q9Y5W7 946 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 WNT6Q9Y6F9 365 aa6.65□□□□□ -1.34
VPS25-204ENST00000589577 ITPR3Q14573 2671 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 C2CD3Q4AC94 2353 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 IGHV1OR15-9A0A0B4J2B8 117 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 TCRBV21S2A2A0A5A6 115 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 LRRIQ4A6NIV6 560 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 ZBTB43O43298 467 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 MARCH6O60337 910 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 ALDH1A2O94788 518 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 KLF8O95600 359 aaPredicted RBP6.64□□□□□ -1.35
VPS25-204ENST00000589577 GABRG2P18507 467 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 GNA11P29992 359 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 CDC25CP30307 473 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 IL12RB1P42701 662 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 KIR2DL1P43626 348 aaPredicted RBP6.64□□□□□ -1.35
VPS25-204ENST00000589577 ALDH1A3P47895 512 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 CDR1P51861 262 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 CYP4A11Q02928 519 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 USP4Q13107 963 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 GPR17Q13304 367 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 PRPF4BQ13523 1007 aaKnown RBP6.64□□□□□ -1.35
VPS25-204ENST00000589577 MTF1Q14872 753 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 ZNF77Q15935 545 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 EMC10Q5UCC4 262 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 TXNDC8Q6A555 127 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 DHRS13Q6UX07 377 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 LRRC69Q6ZNQ3 347 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 RUFY3Q7L099 469 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 OTUD6AQ7L8S5 288 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 ZNF513Q8N8E2 541 aaPredicted RBP6.64□□□□□ -1.35
VPS25-204ENST00000589577 TRIML1Q8N9V2 468 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 SETD7Q8WTS6 366 aaKnown RBP6.64□□□□□ -1.35
VPS25-204ENST00000589577 OSCP1Q8WVF1 389 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 HAS1Q92839 578 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 TCEANC2Q96MN5 208 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 PNMA5Q96PV4 448 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 KIF9Q9HAQ2 790 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 KCNMB3Q9NPA1 279 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 CALCOCO1Q9P1Z2 691 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 BCCIPQ9P287 314 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS25-204ENST00000589577 IL17BQ9UHF5 180 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 PCDHB8Q9UN66 801 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms