RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
MBD1-218ENST00000589541 CCL26Q9Y258 94 aa12.71□□□□□ -0.37
MBD1-218ENST00000589541 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
MBD1-218ENST00000589541 ANK1P16157 1881 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 SPTBN2O15020 2390 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 PRR5-ARHGAP8B1AHC4 643 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 K7ESF4 209 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 HUS1O60921 280 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 F11P03951 625 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 SYT1P21579 422 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 SDHBP21912 280 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 HOXC13P31276 330 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 STAT6P42226 847 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 ATXN1P54253 815 aaKnown RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 ARHGAP8P85298 464 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 BFSP1Q12934 665 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 DDR2Q16832 855 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 CSGALNACT2Q8N6G5 542 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 CBWD1Q9BRT8 395 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 FGFBP2Q9BYJ0 223 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
MBD1-218ENST00000589541 DDX43Q9NXZ2 648 aaKnown RBP12.7□□□□□ -0.38
MBD1-218ENST00000589541 A0A087X0B3 334 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 EXTL3O43909 919 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 PAPSS2O95340 614 aaPredicted RBP12.69□□□□□ -0.38
MBD1-218ENST00000589541 RETP07949 1114 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 KRT19P08727 400 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 GARTP22102 1010 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 CYP2F1P24903 491 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 NFE2Q16621 373 aaPredicted RBP12.69□□□□□ -0.38
MBD1-218ENST00000589541 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
MBD1-218ENST00000589541 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 LRRC52Q8N7C0 313 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
MBD1-218ENST00000589541 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 ACBD6Q9BR61 282 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 EBF3Q9H4W6 596 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 PCIF1Q9H4Z3 704 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 HPS4Q9NQG7 708 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 ITGA11Q9UKX5 1188 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
MBD1-218ENST00000589541 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
MBD1-218ENST00000589541 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 FRMD3A2A2Y4 597 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 OTOL1A6NHN0 477 aaPredicted RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 HCRTO43612 131 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 PRPF6O94906 941 aaKnown RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 LDHAP00338 332 aaKnown RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 CSH1P0DML2 217 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 CSH2P0DML3 217 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 DDX6P26196 483 aaKnown RBP eCLIP12.68□□□□□ -0.38
MBD1-218ENST00000589541 CNR2P34972 360 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 RBP5P82980 135 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 MYL7Q01449 175 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 ALCAMQ13740 583 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 RUNX3Q13761 415 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 CEP68Q76N32 757 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 MON1AQ86VX9 555 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 TMEM86AQ8N2M4 240 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 PDILTQ8N807 584 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 TTC16Q8NEE8 873 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 CXorf38Q8TB03 319 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 RIN3Q8TB24 985 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
MBD1-218ENST00000589541 USP28Q96RU2 1077 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
MBD1-218ENST00000589541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
MBD1-218ENST00000589541 TMEM191BP0C7N4 346 aa12.67□□□□□ -0.38
MBD1-218ENST00000589541 ARSAP15289 507 aa12.67□□□□□ -0.38
MBD1-218ENST00000589541 HOXA6P31267 233 aa12.67□□□□□ -0.38
MBD1-218ENST00000589541 PXNP49023 591 aaPredicted RBP12.67□□□□□ -0.38
MBD1-218ENST00000589541 GRSF1Q12849 480 aaKnown RBP eCLIP12.67□□□□□ -0.38
MBD1-218ENST00000589541 SLC39A14Q15043 492 aa12.67□□□□□ -0.38
MBD1-218ENST00000589541 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
MBD1-218ENST00000589541 FSTL4Q6MZW2 842 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms