RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 DPH6Q7L8W6 267 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 YAF2Q8IY57 180 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 ATAD1Q8NBU5 361 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 KIAA0895Q8NCT3 520 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 DNASE1L2Q92874 299 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 TCEAL4Q96EI5 215 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 HPDLQ96IR7 371 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 ACBD6Q9BR61 282 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 TBC1D17Q9HA65 648 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 DDX43Q9NXZ2 648 aaKnown RBP11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 R4GN57 208 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 FRYQ5TBA9 3013 aa11.37□□□□□ -0.59
CLPTM1-211ENST00000589347 CEP295Q9C0D2 2601 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 PHACTR2O75167 634 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 VNN2O95498 520 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 RPN1P04843 607 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 HOXD13P35453 343 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 CCR2P41597 374 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 TEAD2Q15562 447 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 MAPRE1Q15691 268 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 ST3GAL2Q16842 350 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 RSPO4Q2I0M5 234 aaPredicted RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 KRBA2Q6ZNG9 492 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 C4orf50Q6ZRC1 276 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 TRAPPC11Q7Z392 1133 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 TMC8Q8IU68 726 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 SMARCD2Q92925 531 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 CCDC127Q96BQ5 260 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 BORCS6Q96GS4 357 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 ASB16Q96NS5 453 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 ATXN3LQ9H3M9 355 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 ABCB6Q9NP58 842 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 SIX4Q9UIU6 781 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 HOOK1Q9UJC3 728 aaKnown RBP11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 FRMD4BQ9Y2L6 1034 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 SPEGQ15772 3267 aa11.36□□□□□ -0.59
CLPTM1-211ENST00000589347 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 KRBA1A5PL33 1030 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 PDXKO00764 312 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 DPYSL4O14531 572 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 CSH1P0DML2 217 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 CSH2P0DML3 217 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 HAPLN1P10915 354 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 TRIM21P19474 475 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 DDX6P26196 483 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 GABRR2P28476 465 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 ATICP31939 592 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 MAGEA9P43362 315 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 STK4Q13043 487 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 BIRC3Q13489 604 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 DNAJB7Q7Z6W7 309 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SPATA2LQ8IUW3 424 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SLC9A9Q8IVB4 645 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 TTC9BQ8N6N2 239 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SUMF1Q8NBK3 374 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 OR5B17Q8NGF7 314 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 MMS19Q96T76 1030 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 LPIN3Q9BQK8 851 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 TRMT61BQ9BVS5 477 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 DNAJC25Q9H1X3 360 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 CRISPLD1Q9H336 500 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 BRD9Q9H8M2 597 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 RMND1Q9NWS8 449 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 CDH9Q9ULB4 789 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 ASPMQ8IZT6 3477 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
CLPTM1-211ENST00000589347 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 SOAT2O75908 522 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 ZNF202O95125 648 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 STAU1O95793 577 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 NR3C1P04150 777 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 P4HA1P13674 534 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 PSMC3P17980 439 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 ATF6P18850 670 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 WARSP23381 471 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 FCARP24071 287 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 RPL13P26373 211 aaKnown RBP11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 ANXA13P27216 316 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 GPC5P78333 572 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 DPYDQ12882 1025 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 KCNB1Q14721 858 aa11.34□□□□□ -0.59
CLPTM1-211ENST00000589347 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms