RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 ATXN3LQ9H3M9 355 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 UBE4BO95155 1302 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ATP2C2O75185 946 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 LRRN2O75325 713 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 MICAL2O94851 1124 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
RFX1-204ENST00000588885 RPN1P04843 607 aaKnown RBP12.39□□□□□ -0.43
RFX1-204ENST00000588885 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
RFX1-204ENST00000588885 ATF6P18850 670 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 FCARP24071 287 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 GABRR2P28476 465 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 EPHA5P54756 1037 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ZNF445P59923 1031 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
RFX1-204ENST00000588885 PSMD6Q15008 389 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 GAREM2Q75VX8 874 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ELOA2Q8IYF1 753 aaPredicted RBP12.39□□□□□ -0.43
RFX1-204ENST00000588885 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 LEMD2Q8NC56 503 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ASB16Q96NS5 453 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 GTF3C4Q9UKN8 822 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 ASB3Q9Y575 518 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
RFX1-204ENST00000588885 SCN1AP35498 2009 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 ANK1P16157 1881 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 PHACTR2O75167 634 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 CLSTN1O94985 981 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 CYP2F1P24903 491 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 LMO2P25791 158 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
RFX1-204ENST00000588885 CYP4F8P98187 520 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 MYL7Q01449 175 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 DPYDQ12882 1025 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 PSMD2Q13200 908 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 VEPH1Q14D04 833 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 DDR2Q16832 855 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
RFX1-204ENST00000588885 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 PLEKHO2Q8TD55 490 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 RSPRY1Q96DX4 576 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 ACBD6Q9BR61 282 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 FUCA2Q9BTY2 467 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 TRMT61BQ9BVS5 477 aaKnown RBP12.38□□□□□ -0.43
RFX1-204ENST00000588885 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 MAGED2Q9UNF1 606 aaPredicted RBP12.38□□□□□ -0.43
RFX1-204ENST00000588885 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 MTF2Q9Y483 593 aaPredicted RBP12.38□□□□□ -0.43
RFX1-204ENST00000588885 DMDP11532 3685 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 NOTCH4Q99466 2003 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 MYO15AQ9UKN7 3530 aa12.38□□□□□ -0.43
RFX1-204ENST00000588885 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 HEPACAM2A8MVW5 462 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 BIN1O00499 593 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 GDI1P31150 447 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 LHX1P48742 406 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 MYL6P60660 151 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 PFKPQ01813 784 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 TYRO3Q06418 890 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 BIRC3Q13489 604 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 TRPC3Q13507 836 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 UBXN2BQ14CS0 331 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 MLF2Q15773 248 aaPredicted RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 VITQ6UXI7 678 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 C2orf15Q8WU43 125 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 KBTBD7Q8WVZ9 684 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 SHDQ96IW2 340 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms