RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RAD9AQ99638 391 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ZSWIM1Q9BR11 485 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 TRIM31Q9BZY9 425 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 EPB41L4BQ9H329 900 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 CNOT10Q9H9A5 744 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 UBE2TQ9NPD8 197 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 MSRAQ9UJ68 235 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 A0A1B0GUA9 196 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 KIAA0391O15091 583 aaKnown RBP15.52■□□□□ 0.08
CCDC43-203ENST00000588210 PMM2O15305 246 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 ABCD1P33897 745 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 PTGIRP43119 386 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 RAB27AP51159 221 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 RABGGTBP53611 331 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 GPC5P78333 572 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 PPP3CAQ08209 521 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 ODF2Q5BJF6 829 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 ZDHHC24Q6UX98 284 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 RDH13Q8NBN7 331 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 FAM105AQ9NUU6 356 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 TMEM161AQ9NX61 479 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 CTTNBP2NLQ9P2B4 639 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 ATP8A1Q9Y2Q0 1164 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 INSL6Q9Y581 213 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 CAPN7Q9Y6W3 813 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 CNTNAP2Q9UHC6 1331 aa15.52■□□□□ 0.08
CCDC43-203ENST00000588210 SOX1O00570 391 aaPredicted RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 B4GALT5O43286 388 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 RTN2O75298 545 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 EOMESO95936 686 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 FTLP02792 175 aaPredicted RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 CTNNA2P26232 953 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 MCCD1P59942 119 aaPredicted RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 SNRPFP62306 86 aaKnown RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 HTRA4P83105 476 aaPredicted RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 IFFO1Q0D2I5 559 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 C1orf220Q5T0J3 134 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 FAM117BQ6P1L5 589 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 HAUS6Q7Z4H7 955 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 ECHDC2Q86YB7 292 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.07
CCDC43-203ENST00000588210 CPB2Q96IY4 423 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 ST6GALNAC4Q9H4F1 302 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 PCYOX1Q9UHG3 505 aa15.52■□□□□ 0.07
CCDC43-203ENST00000588210 ZNF623O75123 536 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 DNAJB2P25686 324 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 PBX2P40425 430 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 CDR1P51861 262 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 STRN3Q13033 797 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 RAPGEF5Q92565 580 aa15.51■□□□□ 0.07
CCDC43-203ENST00000588210 PABPC3Q9H361 631 aaKnown RBP15.51■□□□□ 0.07
CCDC43-203ENST00000588210 DGKIO75912 1065 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GZMAP12544 262 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GCLMP48507 274 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PMS2P54278 862 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 KCTD19Q17RG1 926 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GPR153Q6NV75 609 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 TAS1R3Q7RTX0 852 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 ADAT2Q7Z6V5 191 aaKnown RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PRELID2Q8N945 189 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 EPS8L1Q8TE68 723 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 KRT35Q92764 455 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 CENPTQ96BT3 561 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 YME1L1Q96TA2 773 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 CBWD1Q9BRT8 395 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GRHL1Q9NZI5 618 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 HSPBP1Q9NZL4 362 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PARP2Q9UGN5 583 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 NOCTQ9UK39 431 aaKnown RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 TISP43B9A030 160 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PODXLO00592 558 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 CHRNB2P17787 502 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 USP8P40818 1118 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 MARCKSL1P49006 195 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 MXI1P50539 228 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PEX5P50542 639 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 GTF2BQ00403 316 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 CYP1B1Q16678 543 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 TMEM132AQ24JP5 1023 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 SEL1L2Q5TEA6 688 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 FBXW10Q5XX13 1052 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 ZNF598Q86UK7 904 aaKnown RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 FAM71AQ8IYT1 594 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PLEKHO2Q8TD55 490 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 CD101Q93033 1021 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 TIFAQ96CG3 184 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 ZNF689Q96CS4 500 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 PGM2Q96G03 612 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 LRCH3Q96II8 777 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 RUNDC3BQ96NL0 473 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
CCDC43-203ENST00000588210 LRRC4CQ9HCJ2 640 aa15.5■□□□□ 0.07
CCDC43-203ENST00000588210 YBX2Q9Y2T7 364 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms