RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 XYLT2Q9H1B5 865 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 CGNQ9P2M7 1197 aaKnown RBP17.28■□□□□ 0.36
CXXC1-209ENST00000587342 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 PCDHB5Q9Y5E4 795 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 OBSL1O75147 1896 aa17.28■□□□□ 0.36
CXXC1-209ENST00000587342 NUP210Q8TEM1 1887 aaPredicted RBP17.28■□□□□ 0.36
CXXC1-209ENST00000587342 LRRIQ3A6PVS8 624 aaPredicted RBP17.27■□□□□ 0.36
CXXC1-209ENST00000587342 ARNTLO00327 626 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 STK25O00506 426 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 EXOC3O60645 756 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 TNNI1P19237 187 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 CYP2F1P24903 491 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 SMARCB1Q12824 385 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 MYO1EQ12965 1108 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 TDRD10Q5VZ19 366 aaKnown RBP17.27■□□□□ 0.36
CXXC1-209ENST00000587342 TPRG1Q6ZUI0 275 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 SPATA18Q8TC71 538 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
CXXC1-209ENST00000587342 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 ATXN3LQ9H3M9 355 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
CXXC1-209ENST00000587342 USP34Q70CQ2 3546 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 HEPACAM2A8MVW5 462 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 TADA3O75528 432 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 NR3C1P04150 777 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 MYL1P05976 194 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 RFX1P22670 979 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 WARSP23381 471 aaKnown RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 MYL6P60660 151 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 DLG4P78352 724 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 CLDN10P78369 228 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 MYL7Q01449 175 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 PFKPQ01813 784 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 PRKCQQ04759 706 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 PSMD2Q13200 908 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 VEPH1Q14D04 833 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 ANGPT1Q15389 498 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 NFE2Q16621 373 aaPredicted RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 DDR2Q16832 855 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 C1orf220Q5T0J3 134 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 GPR158Q5T848 1215 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 FAM171BQ6P995 826 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 SLC9A9Q8IVB4 645 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 ZNF687Q8N1G0 1237 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 PARD3BQ8TEW8 1205 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 TMEM174Q8WUU8 243 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 SYT15Q9BQS2 421 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 TRMT61BQ9BVS5 477 aaKnown RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 SMG9Q9H0W8 520 aaKnown RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 ABCB6Q9NP58 842 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 SIT1Q9Y3P8 196 aa17.26■□□□□ 0.35
CXXC1-209ENST00000587342 KIF26AQ9ULI4 1882 aaPredicted RBP17.26■□□□□ 0.35
CXXC1-209ENST00000587342 F5P12259 2224 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 PTPRDP23468 1912 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 MIA3Q5JRA6 1907 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 KANSL1LA0AUZ9 987 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 ZNF202O95125 648 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 VNN1O95497 513 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 PSMC3P17980 439 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 TARSP26639 723 aaKnown RBP17.25■□□□□ 0.35
CXXC1-209ENST00000587342 GDI1P31150 447 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 LHX1P48742 406 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 NLRP12P59046 1061 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 DPH6Q7L8W6 267 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 DNASE1L2Q92874 299 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 BRD9Q9H8M2 597 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 LTB4R2Q9NPC1 389 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 DENND4CQ5VZ89 1909 aa17.25■□□□□ 0.35
CXXC1-209ENST00000587342 PATJQ8NI35 1801 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 PDXKO00764 312 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 NOL4O94818 638 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 F11P03951 625 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 PCSK1P29120 753 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 FCHO2Q0JRZ9 810 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 FZD5Q13467 585 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 BECN1Q14457 450 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 UBXN2BQ14CS0 331 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 MFSD6LQ8IWD5 586 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 MAML2Q8IZL2 1156 aaPredicted RBP17.24■□□□□ 0.35
CXXC1-209ENST00000587342 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
CXXC1-209ENST00000587342 RIN3Q8TB24 985 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 DEPDC1BQ8WUY9 529 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 SHDQ96IW2 340 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 MMS19Q96T76 1030 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 SLC46A2Q9BY10 475 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 GPR88Q9GZN0 384 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 DPEP3Q9H4B8 488 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 TASP1Q9H6P5 420 aa17.24■□□□□ 0.35
CXXC1-209ENST00000587342 SMYD3Q9H7B4 428 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms