RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 C2orf42Q9NWW7 574 aa16.9■□□□□ 0.3
VAT1-205ENST00000587173 RBAKQ9NYW8 714 aaPredicted RBP16.9■□□□□ 0.3
VAT1-205ENST00000587173 ZMYM5Q9UJ78 669 aa16.9■□□□□ 0.3
VAT1-205ENST00000587173 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
VAT1-205ENST00000587173 WDR87Q6ZQQ6 2873 aa16.9■□□□□ 0.3
VAT1-205ENST00000587173 PRPF40AO75400 957 aaKnown RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 F11P03951 625 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 ITGB3P05106 788 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 HMGA1P17096 107 aaKnown RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 GARTP22102 1010 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 DDX6P26196 483 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■■■□ 19.7
VAT1-205ENST00000587173 CNR2P34972 360 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 AVPR1AP37288 418 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 CASP5P51878 434 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 NFE2Q16621 373 aaPredicted RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 STKLD1Q8NE28 680 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 RTKNQ9BST9 563 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 TMEM206Q9H813 350 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 L1RE1Q9UN81 338 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 CCL26Q9Y258 94 aa16.89■□□□□ 0.29
VAT1-205ENST00000587173 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
VAT1-205ENST00000587173 SCN1AP35498 2009 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 GOLGA8IPA6NC78 632 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 GOLGA8JA6NMD2 632 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 HUS1O60921 280 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 CSH1P0DML2 217 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 CSH2P0DML3 217 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 BFSP1Q12934 665 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 TXNDC8Q6A555 127 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 TRIM68Q6AZZ1 485 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 STXBP4Q6ZWJ1 553 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 LRRC52Q8N7C0 313 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 LEO1Q8WVC0 666 aaPredicted RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 MRPS31Q92665 395 aaKnown RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 USP13Q92995 863 aaPredicted RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 FAM84AQ96KN4 292 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 USP28Q96RU2 1077 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 FAM83CQ9BQN1 747 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 FGFBP2Q9BYJ0 223 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 KIF9Q9HAQ2 790 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 DDX43Q9NXZ2 648 aaKnown RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.88■□□□□ 0.29
VAT1-205ENST00000587173 CEP250Q9BV73 2442 aa16.88■□□□□ 0.29
VAT1-205ENST00000587173 NUP210Q8TEM1 1887 aaPredicted RBP16.87■□□□□ 0.29
VAT1-205ENST00000587173 STX6O43752 255 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 EXTL3O43909 919 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 LRP3O75074 770 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 ACAT1P24752 427 aaKnown RBP16.87■□□□□ 0.29
VAT1-205ENST00000587173 HOXC13P31276 330 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 MYL7Q01449 175 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 RUNX3Q13761 415 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 STK38Q15208 465 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
VAT1-205ENST00000587173 SCARA3Q6AZY7 606 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 CEP68Q76N32 757 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 WDR5BQ86VZ2 330 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 ACBD6Q9BR61 282 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 CBWD1Q9BRT8 395 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 EBF3Q9H4W6 596 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 PCIF1Q9H4Z3 704 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 SEMA4GQ9NTN9 838 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 TDP1Q9NUW8 608 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 MTMR6Q9Y217 621 aa16.87■□□□□ 0.29
VAT1-205ENST00000587173 ANK1P16157 1881 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 DCDC2BA2VCK2 349 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 KIAA0391O15091 583 aaKnown RBP16.86■□□□□ 0.29
VAT1-205ENST00000587173 KRT19P08727 400 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 CYP2F1P24903 491 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 HOXA6P31267 233 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 RPL10AP62906 217 aaKnown RBP16.86■□□□□ 0.29
VAT1-205ENST00000587173 RBP5P82980 135 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 GRSF1Q12849 480 aaKnown RBP eCLIP16.86■□□□□ 0.29
VAT1-205ENST00000587173 DDR2Q16832 855 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 TMEM196Q5HYL7 178 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 PKN3Q6P5Z2 889 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 MON1AQ86VX9 555 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 TMEM86AQ8N2M4 240 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 PDILTQ8N807 584 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 CXorf38Q8TB03 319 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 RIN3Q8TB24 985 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
VAT1-205ENST00000587173 MTMR12Q9C0I1 747 aa16.86■□□□□ 0.29
VAT1-205ENST00000587173 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms