RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 FMNL3Q8IVF7 1028 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 SLC4A11Q8NBS3 891 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 HEXIM2Q96MH2 286 aaKnown RBP14.5□□□□□ -0.09
VMP1-203ENST00000586245 TWNKQ96RR1 684 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 ELOVL4Q9GZR5 314 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 GTF3C4Q9UKN8 822 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 CNTN6Q9UQ52 1028 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 NME7Q9Y5B8 376 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 MTCH2Q9Y6C9 303 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 ATP8B3O60423 1300 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 A0A1W2PQJ5 194 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MYBPHLA2RUH7 354 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 PER2O15055 1255 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 CLASP2O75122 1294 aaKnown RBP14.49□□□□□ -0.09
VMP1-203ENST00000586245 ADCY5O95622 1261 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 GLUD1P00367 558 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 C1RP00736 705 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 CD19P15391 556 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 POU3F3P20264 500 aaPredicted RBP14.49□□□□□ -0.09
VMP1-203ENST00000586245 ELF1P32519 619 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 NRIP1P48552 1158 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MRE11P49959 708 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 BPIFB4P59827 614 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 CYP27A1Q02318 531 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 ADGRE1Q14246 886 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 DUSP6Q16828 381 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 TCEAL5Q5H9L2 206 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 FAM171BQ6P995 826 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 RNF19BQ6ZMZ0 732 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 TMC6Q7Z403 805 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 ADGRD2Q7Z7M1 963 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 LRRTM3Q86VH5 581 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 SPATA2LQ8IUW3 424 aaPredicted RBP14.49□□□□□ -0.09
VMP1-203ENST00000586245 DRC7Q8IY82 874 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 ZNF461Q8TAF7 563 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MYCBPAPQ8TBZ2 947 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 SPPL2BQ8TCT7 592 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 C2orf15Q8WU43 125 aaKnown RBP14.49□□□□□ -0.09
VMP1-203ENST00000586245 CPLX3Q8WVH0 158 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MED10Q9BTT4 135 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 GPR88Q9GZN0 384 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 CRTAC1Q9NQ79 661 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 AFF4Q9UHB7 1163 aaKnown RBP14.49□□□□□ -0.09
VMP1-203ENST00000586245 DPP7Q9UHL4 492 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 KIAA1257Q9ULG3 409 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MYO6Q9UM54 1294 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 PCDHB5Q9Y5E4 795 aa14.49□□□□□ -0.09
VMP1-203ENST00000586245 MTMR11A4FU01 709 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 RNF225M0QZC1 329 aaPredicted RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 CYP26A1O43174 497 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 TGM5O43548 720 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 ABLIM3O94929 683 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 PNMA6AP0CW24 399 aaPredicted RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 VDRP11473 427 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 GNA15P30679 374 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 SOX5P35711 763 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 CLCN4P51793 760 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 ZNF132P52740 706 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 JAM2P57087 298 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 PTK2Q05397 1052 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 ADCY1Q08828 1119 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 SGO2Q562F6 1265 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 ELMSAN1Q6PJG2 1045 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 FAM71AQ8IYT1 594 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 MICALL1Q8N3F8 863 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 MYLIPQ8WY64 445 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 MYLPFQ96A32 169 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 CDX2Q99626 313 aaPredicted RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 PKMYT1Q99640 499 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 LPIN3Q9BQK8 851 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 TTYH3Q9C0H2 523 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 NUCKS1Q9H1E3 243 aaKnown RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 IGFLR1Q9H665 355 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 TMLHEQ9NVH6 421 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 ABI2Q9NYB9 513 aaPredicted RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 CAPN11Q9UMQ6 739 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 LUC7L2Q9Y383 392 aaKnown RBP14.48□□□□□ -0.09
VMP1-203ENST00000586245 CDH23Q9H251 3354 aa14.48□□□□□ -0.09
VMP1-203ENST00000586245 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 LRRC53A6NM62 1247 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 THAP12O43422 761 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 MED7O43513 233 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 GFPT2O94808 682 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 GYPCP04921 128 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 SRGAP2BP0DMP2 458 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 ATF2P15336 505 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 FOSL2P15408 326 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 FERP16591 822 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 CDC25BP30305 580 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 PDE6CP51160 858 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 ZBED6P86452 979 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 STILQ15468 1287 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 LILRA6Q6PI73 481 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.47□□□□□ -0.09
VMP1-203ENST00000586245 C12orf29Q8N999 325 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 BAP1Q92560 729 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms