RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ADH1AP07327 375 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 PDGFRBP09619 1106 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 GZMAP12544 262 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 CPB1P15086 417 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 DNAJB2P25686 324 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 PBX3P40426 434 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 NDUFV1P49821 464 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 BCAT1P54687 386 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 TAP1Q03518 808 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ZNF394Q53GI3 561 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 LCLAT1Q6UWP7 414 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 VSTM1Q6UX27 236 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 TMC7Q7Z402 723 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 SLC47A2Q86VL8 602 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 SPATA2LQ8IUW3 424 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ZNF606Q8WXB4 792 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 CYFIP2Q96F07 1278 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 SMARCD1Q96GM5 515 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 HNRNPABQ99729 332 aaKnown RBP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 PRO3102Q9H379 93 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 NHEJ1Q9H9Q4 299 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 CYLDQ9NQC7 956 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 ENTPD7Q9NQZ7 604 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 EHD2Q9NZN4 543 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 TIMM13Q9Y5L4 95 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-202ENST00000585333 LCHNA4D1U4 455 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 H3BNC9 293 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 GPR17Q13304 367 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 GPM6BQ13491 265 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 SLC18A3Q16572 532 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 CFAP221Q4G0U5 840 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 RTP2Q5QGT7 225 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 KIAA0319Q5VV43 1072 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
TRIM47-202ENST00000585333 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 PNPLA8Q9NP80 782 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
TRIM47-202ENST00000585333 NOCTQ9UK39 431 aaKnown RBP13.72□□□□□ -0.21
TRIM47-202ENST00000585333 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIM47-202ENST00000585333 PCDHB5Q9Y5E4 795 aa13.72□□□□□ -0.21
TRIM47-202ENST00000585333 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 F8W810 466 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 O00370 1275 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 TRIM66O15016 1216 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 SKILP12757 684 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 MAGEA11P43364 429 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 ACADSBP45954 432 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 NSFP46459 744 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 TUFMP49411 452 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 KIF11P52732 1056 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 RPL10AP62906 217 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 PLD1Q13393 1074 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 MDH1BQ5I0G3 518 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 HGSNATQ68CP4 663 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 WDR59Q6PJI9 974 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 NOP9Q86U38 636 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 OSTM1Q86WC4 334 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 LNX1Q8TBB1 728 aaPredicted RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 IPO4Q8TEX9 1081 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 POF1BQ8WVV4 589 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 CALR3Q96L12 384 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 UBXN6Q9BZV1 441 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 ARHGAP20Q9P2F6 1191 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 AFF4Q9UHB7 1163 aaKnown RBP13.71□□□□□ -0.21
TRIM47-202ENST00000585333 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
TRIM47-202ENST00000585333 TSC2P49815 1807 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 M0QYV0 167 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 TBC1D4O60343 1298 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 CXCL14O95715 111 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 MYBL1P10243 752 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 BRD2P25440 801 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 LMO2P25791 158 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 ELF1P32519 619 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms