RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PIRO00625 290 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 CYB561D2O14569 222 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TRDMT1O14717 391 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 EXTL3O43909 919 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TBCAO75347 108 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 SOAT2O75908 522 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 RHOBTB1O94844 696 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 HAPLN1P10915 354 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 DRD1P21728 446 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 UBA7P41226 1012 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 RAP1GAPP47736 663 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TSPY1Q01534 308 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 POU5F1Q01860 360 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 KARSQ15046 597 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PDGFRLQ15198 375 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 STK38Q15208 465 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 ELF2Q15723 593 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 NFE2Q16621 373 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TTC9BQ8N6N2 239 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 RASSF8Q8NHQ8 419 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PYM1Q9BRP8 204 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 ZHX3Q9H4I2 956 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TDP1Q9NUW8 608 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 UXTQ9UBK9 157 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PCDHA7Q9UN72 937 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 PCDHB5Q9Y5E4 795 aa11.57□□□□□ -0.56
CSNK1D-226ENST00000585026 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ANO9A1A5B4 782 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 PPEF2O14830 753 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CUTAO60888 179 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CSH1P0DML2 217 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CSH2P0DML3 217 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ATF6P18850 670 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CMA1P23946 247 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 PNPLA4P41247 253 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 SHC2P98077 582 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CEBPZQ03701 1054 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 NR1H3Q13133 447 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 POSTNQ15063 836 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 SF3A2Q15428 464 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 SV2CQ496J9 727 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 TMEM119Q4V9L6 283 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 STPG1Q5TH74 334 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 C11orf74Q86VG3 221 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 NT5DC4Q86YG4 428 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CPA6Q8N4T0 437 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ACDQ96AP0 544 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ZC3H10Q96K80 434 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 FAM83CQ9BQN1 747 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 DPP3Q9NY33 737 aa11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 ABI2Q9NYB9 513 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 SRPRBQ9Y5M8 271 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-226ENST00000585026 CNOT1A5YKK6 2376 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 COL4A2P08572 1712 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 TCHHQ07283 1943 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 KPNA7A9QM74 516 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 FAM189A1O60320 539 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 RNF40O75150 1001 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 IL18RAPO95256 599 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 NFICP08651 508 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 PMLP29590 882 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 MPLP40238 635 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 ME1P48163 572 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 PXNP49023 591 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 ZNF131P52739 623 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 NLRP12P59046 1061 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 ZNF268Q14587 947 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 ARSHQ5FYA8 562 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 WDR44Q5JSH3 913 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 N4BP2L1Q5TBK1 243 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 DAB2IPQ5VWQ8 1189 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 WSCD1Q658N2 575 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 KBTBD6Q86V97 674 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 MON1AQ86VX9 555 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 P2RY13Q9BPV8 354 aa11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 SMG9Q9H0W8 520 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-226ENST00000585026 EBF3Q9H4W6 596 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms