RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	BEST2	Q8NFU1	509 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	CAGE1	Q8TC20	777 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	LINC01599	Q8WXQ3	324 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	TAF4B	Q92750	862 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	JAKMIP2	Q96AA8	810 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	PBXIP1	Q96AQ6	731 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	HPDL	Q96IR7	371 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	PCDHB18P	Q96TA0	734 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	GAD1	Q99259	594 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	AGPAT1	Q99943	283 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	TRAIP	Q9BWF2	469 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	PACSIN1	Q9BY11	444 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	SEZ6L	Q9BYH1	1024 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	IFIH1	Q9BYX4	1025 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	SMYD3	Q9H7B4	428 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	GOLGA2P5	Q9HBQ8	144 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	MIOS	Q9NXC5	875 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	CACNG4	Q9UBN1	327 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	NOCT	Q9UK39	431 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	ITGA11	Q9UKX5	1188 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	UBQLN1	Q9UMX0	589 aa	Known RBP	6.25	□□□□□ -1.41
MSI2-219	ENST00000584476	DUSP10	Q9Y6W6	482 aa		6.25	□□□□□ -1.41
MSI2-219	ENST00000584476		A0A0U1RQF3	1178 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	GOLGA6L9	A6NEM1	432 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ARL5C	A6NH57	179 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TMCO5B	A8MYB1	307 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	DCDC2C	A8MYV0	355 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	PIR	O00625	290 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	MSTN	O14793	375 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TLR3	O15455	904 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	OIP5	O43482	229 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	LZTS3	O60299	673 aa	Predicted RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ZNF623	O75123	536 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	OFD1	O75665	1012 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	IPO7	O95373	1038 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CCDC172	P0C7W6	258 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TNNT1	P13805	278 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TNFAIP3	P21580	790 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ANXA13	P27216	316 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CYP2C18	P33260	490 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	MAP2K3	P46734	347 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	RAB27A	P51159	221 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	SCNN1G	P51170	649 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ZNF132	P52740	706 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CCL23	P55773	120 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	FMO1	Q01740	532 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	BMS1	Q14692	1282 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	NAB2	Q15742	525 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	LRRC26	Q2I0M4	334 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ARHGAP29	Q52LW3	1261 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	OXLD1	Q5BKU9	147 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CCDC122	Q5T0U0	273 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	C9orf57	Q5W0N0	161 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ALKBH5	Q6P6C2	394 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TMEM270	Q6UE05	265 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ECHDC2	Q86YB7	292 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	HACE1	Q8IYU2	909 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	RPUSD2	Q8IZ73	545 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	DEPDC4	Q8N2C3	294 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	DBF4B	Q8NFT6	615 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	DDX1	Q92499	740 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	SCLY	Q96I15	445 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	PAWR	Q96IZ0	340 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	FAM81B	Q96LP2	452 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	PPP1R10	Q96QC0	940 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	WDR24	Q96S15	920 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ZSWIM1	Q9BR11	485 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	BCO2	Q9BYV7	579 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	WNT8A	Q9H1J5	351 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	C11orf49	Q9H6J7	331 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	VRTN	Q9H8Y1	702 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	RGS18	Q9NS28	235 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CISH	Q9NSE2	258 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	SEPT11	Q9NVA2	429 aa	Known RBP	6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TAS2R14	Q9NYV8	317 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	NAGPA	Q9UK23	515 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	GUCA1B	Q9UMX6	200 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	CNTN6	Q9UQ52	1028 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	ATP11B	Q9Y2G3	1177 aa		6.24	□□□□□ -1.41
MSI2-219	ENST00000584476	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	MACROD2	A1Z1Q3	448 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476		C9IYK1	514 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	ENPP3	O14638	875 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	PJA2	O43164	708 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	MOCS3	O95396	460 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	STAU1	O95793	577 aa	Known RBP	6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	POMC	P01189	267 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	CYP3A5	P20815	502 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	BRD2	P25440	801 aa	Known RBP	6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	GATM	P50440	423 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	PDE6C	P51160	858 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	RAD23B	P54727	409 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	GNG11	P61952	73 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	ETF1	P62495	437 aa	Known RBP	6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	FAM189B	P81408	668 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	CDR2	Q01850	454 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	KIF5A	Q12840	1032 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	MYO1E	Q12965	1108 aa		6.23	□□□□□ -1.41
MSI2-219	ENST00000584476	ORC1	Q13415	861 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms