RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 GFPT2O94808 682 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 C1RP00736 705 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 ACAT1P24752 427 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 GNA15P30679 374 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 HNRNPH3P31942 346 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 NDUFV1P49821 464 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 GSDMDP57764 484 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 ERVFC1P60507 584 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 CAMK1Q14012 370 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 ASIC2Q16515 512 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 SGO2Q562F6 1265 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 PLPP4Q5VZY2 271 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 TPGS2Q68CL5 300 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 FAM171BQ6P995 826 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 OR10T2Q8NGX3 314 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 C2orf15Q8WU43 125 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 TWNKQ96RR1 684 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 PKMYT1Q99640 499 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 CLSTN3Q9BQT9 956 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 DPEP3Q9H4B8 488 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 LMCD1Q9NZU5 365 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 MAFFQ9ULX9 164 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 BZW2Q9Y6E2 419 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 CDY1Q9Y6F8 540 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 DENND4CQ5VZ89 1909 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 MYO16Q9Y6X6 1858 aa12.4□□□□□ -0.42
CDRT1-207ENST00000583965 REV3LO60673 3130 aa12.4□□□□□ -0.43
CDRT1-207ENST00000583965 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 C2orf71A6NGG8 1288 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 EPOPA6NHQ4 379 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 MED7O43513 233 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 HCRTO43612 131 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ADH1AP07327 375 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
CDRT1-207ENST00000583965 CPB1P15086 417 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 OR1D2P34982 312 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 PRKCIP41743 596 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 PDE6CP51160 858 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 PSMC1P62191 440 aaKnown RBP12.39□□□□□ -0.43
CDRT1-207ENST00000583965 GPR17Q13304 367 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 RAB33AQ14088 237 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 MEA1Q16626 185 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 C4orf50Q6ZRC1 276 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 TC2NQ8N9U0 490 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 MICAL1Q8TDZ2 1067 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
CDRT1-207ENST00000583965 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDRT1-207ENST00000583965 PANX2Q96RD6 677 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 CRTAC1Q9NQ79 661 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ABHD10Q9NUJ1 306 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
CDRT1-207ENST00000583965 GTF3C4Q9UKN8 822 aa12.39□□□□□ -0.43
CDRT1-207ENST00000583965 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 TEX28O15482 410 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 THAP12O43422 761 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ATP2C2O75185 946 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 SERPING1P05155 500 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CNPP09543 421 aaKnown RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CD19P15391 556 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CYP11B1P15538 503 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CA8P35219 290 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ADKP55263 362 aaKnown RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ROR1Q01973 937 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ARID5AQ03989 594 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ORC1Q13415 861 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CNGA2Q16280 664 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 MDH1BQ5I0G3 518 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 RSPO2Q6UXX9 243 aaPredicted RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF461Q8TAF7 563 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF606Q8WXB4 792 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 PPP2R3CQ969Q6 453 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CYFIP2Q96F07 1278 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 KLHL5Q96PQ7 755 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 TMEM209Q96SK2 561 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 HNRNPABQ99729 332 aaKnown RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 TTYH1Q9H313 450 aaPredicted RBP12.38□□□□□ -0.43
CDRT1-207ENST00000583965 ABCB6Q9NP58 842 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
CDRT1-207ENST00000583965 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms