RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MCRS1Q96EZ8 462 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 RPP25Q9BUL9 199 aaKnown RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 DDX23Q9BUQ8 820 aaKnown RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 XYLT2Q9H1B5 865 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 MFSD1Q9H3U5 465 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 ZFP14Q9HCL3 533 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 TRPV5Q9NQA5 729 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 RMND1Q9NWS8 449 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 FBXL21Q9UKT6 434 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 CDH9Q9ULB4 789 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 FRMD4BQ9Y2L6 1034 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 C4BPAP04003 597 aaKnown RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 CSH1P0DML2 217 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 CSH2P0DML3 217 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 ATF6P18850 670 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 CDC25CP30307 473 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 MAGEA11P43364 429 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 PTPN5P54829 565 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 VCPP55072 806 aaKnown RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 MLLT6P55198 1093 aaPredicted RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 PRKCQQ04759 706 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 MGAT5BQ3V5L5 792 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 ZACNQ401N2 412 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 ZCWPW2Q504Y3 356 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 FAM78AQ5JUQ0 283 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 IER5LQ5T953 404 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 TANGO2Q6ICL3 276 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 VSTM1Q6UX27 236 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 OSTM1Q86WC4 334 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 MFSD6LQ8IWD5 586 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 SIX5Q8N196 739 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 PLEKHO2Q8TD55 490 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 GPR152Q8TDT2 470 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 DEPDC1BQ8WUY9 529 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 DNASE1L2Q92874 299 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 CCDC127Q96BQ5 260 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 TRMT2BQ96GJ1 504 aaKnown RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 SHDQ96IW2 340 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 MYRFLQ96LU7 910 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 OSBPL6Q9BZF3 934 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 ARHGEF3Q9NR81 526 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 TMLHEQ9NVH6 421 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 OBP2AQ9NY56 170 aa10.6□□□□□ -0.71
SKA2-208ENST00000583927 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 HOOK1Q9UJC3 728 aaKnown RBP10.6□□□□□ -0.71
SKA2-208ENST00000583927 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 CFHP08603 1231 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 MYL4P12829 197 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 HMGA1P17096 107 aaKnown RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 PSMC3P17980 439 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 NR2F2P24468 414 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 DDX6P26196 483 aaKnown RBP eCLIP10.59□□□□□ -0.71
SKA2-208ENST00000583927 RPL13P26373 211 aaKnown RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 CASP4P49662 377 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 RPL10AP62906 217 aaKnown RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 GPC5P78333 572 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 TRPC3Q13507 836 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 TEAD2Q15562 447 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 WDR72Q3MJ13 1102 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 ZNF658Q5TYW1 1059 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 TDRD10Q5VZ19 366 aaKnown RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 TMEM105Q8N8V8 129 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 TAF4BQ92750 862 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 ZSWIM3Q96MP5 696 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 SEPT5Q99719 369 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 KXD1Q9BQD3 176 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 ZNF334Q9HCZ1 680 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 UXTQ9UBK9 157 aaPredicted RBP10.59□□□□□ -0.71
SKA2-208ENST00000583927 GTF3C4Q9UKN8 822 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 CFAP54Q96N23 3096 aa10.59□□□□□ -0.71
SKA2-208ENST00000583927 MYO16Q9Y6X6 1858 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 A0A1W2PRU2 124 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 AKAP3O75969 853 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 NOL4O94818 638 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 SMC2O95347 1197 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 VNN1O95497 513 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 GLULP15104 373 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 LMO2P25791 158 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 GABRR2P28476 465 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 GNL1P36915 607 aaPredicted RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 MYL6P60660 151 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 TNNC1P63316 161 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 NHLH1Q02575 133 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 TCF15Q12870 199 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 PNOCQ13519 176 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 NCOA4Q13772 614 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 MLF2Q15773 248 aaPredicted RBP10.58□□□□□ -0.72
SKA2-208ENST00000583927 SGSM1Q2NKQ1 1148 aa10.58□□□□□ -0.72
SKA2-208ENST00000583927 SLC44A4Q53GD3 710 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms