RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PLA2G4FQ68DD2 849 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 PLEKHA7Q6IQ23 1121 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 NOP9Q86U38 636 aaKnown RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 TDRPQ86YL5 185 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 LRRC49Q8IUZ0 686 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 CRYGNQ8WXF5 182 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.13□□□□□ -1.439e-9■■■■■ 81.1
RTTN-209ENST00000583043 CMTM5Q96DZ9 223 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 SPATC1LQ9H0A9 340 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 CYP39A1Q9NYL5 469 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 STXBP5LQ9Y2K9 1186 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 ZNF536O15090 1300 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 ASTN2O75129 1339 aaPredicted RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 SLCO1B7G3V0H7 640 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 GRK2P25098 689 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 RAB27AP51159 221 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 BCAT1P54687 386 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 PTPN11Q06124 597 aaPredicted RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 ITGB3BPQ13352 177 aaPredicted RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 NAA25Q14CX7 972 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 CNGA2Q16280 664 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 SH3D19Q5HYK7 790 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 APPL2Q8NEU8 664 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 KCNN1Q92952 543 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 FAR2Q96K12 515 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 TRIM15Q9C019 465 aa6.13□□□□□ -1.43
RTTN-209ENST00000583043 NGRNQ9NPE2 291 aaKnown RBP6.13□□□□□ -1.43
RTTN-209ENST00000583043 C4AP0C0L4 1744 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 C4BP0C0L5 1744 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 EPHB6O15197 1021 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 B4GALT4O60513 344 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 MYL4P12829 197 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TAF6P49848 677 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CPT1AP50416 773 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD20A4Q4UJ75 823 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD20A8PQ5CZ79 823 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD20A2Q5SQ80 823 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD20A1Q5TYW2 823 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 BBS12Q6ZW61 710 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 EFL1Q7Z2Z2 1120 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 GPIHBP1Q8IV16 184 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TEKT4Q8WW24 435 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 INPP5DQ92835 1189 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TMEM143Q96AN5 459 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 FAM149B1Q96BN6 582 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 KIF12Q96FN5 646 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TSPAN17Q96FV3 270 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CDC42EP4Q9H3Q1 356 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 SPATS2LQ9NUQ6 558 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 FBXO28Q9NVF7 368 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 GGA3Q9NZ52 723 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RCCD1A6NED2 376 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 GRIN3BO60391 1043 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RBP3P10745 1247 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 HTR7P34969 479 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 SPRP35270 261 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 SLCO1A2P46721 670 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 PPM1FP49593 454 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 STX1BP61266 288 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 FMO1Q01740 532 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 PPP3CAQ08209 521 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 XRCC4Q13426 336 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ERMARDQ5T6L9 678 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ABHD15Q6UXT9 468 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 LCA5Q86VQ0 697 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RAPGEF5Q92565 580 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TATDN2Q93075 761 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 DDX27Q96GQ7 796 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 HPDLQ96IR7 371 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CTNNAL1Q9UBT7 734 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 AGAP1Q9UPQ3 857 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TNRC6CQ9HCJ0 1690 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 A8MXQ7 604 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TNPO2O14787 897 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 ZNF263O14978 683 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 DDX3YO15523 660 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 KRT16P08779 473 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RRM1P23921 792 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 MMP13P45452 471 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 THOC5Q13769 683 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 TMCO4Q5TGY1 634 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 USP50Q70EL3 339 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 NLRP9Q7RTR0 991 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 SLC26A11Q86WA9 606 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ACMSDQ8TDX5 336 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 HSFY1Q96LI6 401 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 MCEEQ96PE7 176 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 HEMGNQ9BXL5 484 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 LGALS13Q9UHV8 139 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms