RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 CWC27Q6UX04 472 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 NFXL1Q6ZNB6 911 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 TRIM74Q86UV6 250 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 TRIM73Q86UV7 250 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 LMNTD2Q8IXW0 634 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 DEFB119Q8N690 84 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 RIN3Q8TB24 985 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 ZSCAN18Q8TBC5 510 aaPredicted RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 RLN3Q8WXF3 142 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 PMM1Q92871 262 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SMARCD2Q92925 531 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 TNPO1Q92973 898 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 RRP36Q96EU6 259 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 TTPALQ9BTX7 342 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 COLEC11Q9BWP8 271 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SPZ1Q9BXG8 430 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 C1QTNF2Q9BXJ5 285 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 BACH2Q9BYV9 841 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SMG9Q9H0W8 520 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 RWDD1Q9H446 243 aaPredicted RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 DPP7Q9UHL4 492 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 DDX19BQ9UMR2 479 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SSX2IPQ9Y2D8 614 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 MAP4K5Q9Y4K4 846 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 CDY1Q9Y6F8 540 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 ZMYM2Q9UBW7 1377 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PTGESO14684 152 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 ZBTB39O15060 712 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 ATXN7O15265 892 aaPredicted RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 B4GALT5O43286 388 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 CHMP2AO43633 222 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 ERLIN1O75477 346 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 KRT38O76015 456 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 VNN2O95498 520 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 SLFN14P0C7P3 912 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 MSL3P1P0C860 447 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 MYL4P12829 197 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PTPN2P17706 415 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 ENGP17813 658 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 SDSP20132 328 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TMOD1P28289 359 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TKTP29401 623 aaKnown RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 GBP1P32455 592 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 EIF2S3P41091 472 aaKnown RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PRPHP41219 470 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 BRCC3P46736 316 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 CLDN6P56747 220 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 SFSWAPQ12872 951 aaKnown RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PDIA5Q14554 519 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 NAB2Q15742 525 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TUSC1Q2TAM9 212 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 CCDC92Q53HC0 331 aaPredicted RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 MFSD4BQ5TF39 518 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PMS2CLQ68D20 193 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TRIM68Q6AZZ1 485 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 SFTPA1Q8IWL2 248 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 HSCBQ8IWL3 235 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 C1orf131Q8NDD1 294 aaKnown RBP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 CRYGNQ8WXF5 182 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TMEM143Q96AN5 459 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 LENG9Q96B70 501 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PGBD4Q96DM1 585 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TRIM7Q9C029 511 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 UNC45AQ9H3U1 944 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PRORYQ9H606 182 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.59□□□□□ -1.35
NDEL1-213ENST00000582490 IRAK4Q9NWZ3 460 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 KANSL3Q9P2N6 904 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 ZNF232Q9UNY5 417 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PCDHA10Q9Y5I2 948 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 TMEM131Q92545 1883 aa6.59□□□□□ -1.35
NDEL1-213ENST00000582490 PLXND1Q9Y4D7 1925 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 TRABD2BA6NFA1 517 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 PRAMEF12O95522 483 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 FTH1P19P0C7X4 201 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 SFPQP23246 707 aaKnown RBP eCLIP6.58□□□□□ -1.36
NDEL1-213ENST00000582490 STIP1P31948 543 aaKnown RBP6.58□□□□□ -1.36
NDEL1-213ENST00000582490 SREBF1P36956 1147 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 DHPSP49366 369 aaPredicted RBP6.58□□□□□ -1.36
NDEL1-213ENST00000582490 CLK2P49760 499 aaKnown RBP6.58□□□□□ -1.36
NDEL1-213ENST00000582490 RAB27AP51159 221 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 ARPP19P56211 112 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 PTH1RQ03431 593 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 LRRC32Q14392 662 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 TERF2Q15554 542 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 ZNF394Q53GI3 561 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 TRIM61Q5EBN2 209 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 DGKKQ5KSL6 1271 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 ELMSAN1Q6PJG2 1045 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 HEATR3Q7Z4Q2 680 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 DRC7Q8IY82 874 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
NDEL1-213ENST00000582490 ZNF654Q8IZM8 581 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms