RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TICRRQ7Z2Z1 1910 aa24■■□□□ 1.43
CASC3-207ENST00000581849 VPS13AQ96RL7 3174 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 SLFN14P0C7P3 912 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 CD72P21854 359 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 DDX6P26196 483 aaKnown RBP eCLIP23.99■■□□□ 1.43
CASC3-207ENST00000581849 STXBP5Q5T5C0 1151 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 ZNF687Q8N1G0 1237 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 XXYLT1Q8NBI6 393 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 OR5B17Q8NGF7 314 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 RSPRY1Q96DX4 576 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 FUBP3Q96I24 572 aaKnown RBP eCLIP23.99■■□□□ 1.43
CASC3-207ENST00000581849 BLZF1Q9H2G9 400 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 TMLHEQ9NVH6 421 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 SPATA6Q9NWH7 488 aaPredicted RBP23.99■■□□□ 1.43
CASC3-207ENST00000581849 USP25Q9UHP3 1055 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 NCANO14594 1321 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 PTPRJQ12913 1337 aa23.99■■□□□ 1.43
CASC3-207ENST00000581849 DENND4CQ5VZ89 1909 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
CASC3-207ENST00000581849 LAMTOR5O43504 91 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 CSH1P0DML2 217 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 CSH2P0DML3 217 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 RPL10AP62906 217 aaKnown RBP23.98■■□□□ 1.43
CASC3-207ENST00000581849 PSMD6Q15008 389 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 CFAP221Q4G0U5 840 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 ARHGAP29Q52LW3 1261 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 MAML2Q8IZL2 1156 aaPredicted RBP23.98■■□□□ 1.43
CASC3-207ENST00000581849 GOLGA5Q8TBA6 731 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 HPDLQ96IR7 371 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 PIAS3Q9Y6X2 628 aa23.98■■□□□ 1.43
CASC3-207ENST00000581849 DPYSL4O14531 572 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 MYL1P05976 194 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 FAM163BP0C2L3 166 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 HMGA1P17096 107 aaKnown RBP23.97■■□□□ 1.43
CASC3-207ENST00000581849 FZD5Q13467 585 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 CUL4BQ13620 913 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 KNOP1Q1ED39 458 aaKnown RBP23.97■■□□□ 1.43
CASC3-207ENST00000581849 SOWAHAQ2M3V2 549 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 LMBRD2Q68DH5 695 aaPredicted RBP23.97■■□□□ 1.43
CASC3-207ENST00000581849 MAMSTRQ6ZN01 415 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 TRAPPC11Q7Z392 1133 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 OSTM1Q86WC4 334 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 CSGALNACT1Q8TDX6 532 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 GIPC2Q8TF65 315 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 FAM84AQ96KN4 292 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 FNBP1Q96RU3 617 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 CGRRF1Q99675 332 aa23.97■■□□□ 1.43
CASC3-207ENST00000581849 C8orf33Q9H7E9 229 aaPredicted RBP23.97■■□□□ 1.43
CASC3-207ENST00000581849 UXTQ9UBK9 157 aaPredicted RBP23.97■■□□□ 1.43
CASC3-207ENST00000581849 ACTN4O43707 911 aaKnown RBP23.96■■□□□ 1.43
CASC3-207ENST00000581849 CMA1P23946 247 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 CASP1P29466 404 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 AFMP43652 599 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 PLCB2Q00722 1185 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 CYP24A1Q07973 514 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 PSMD2Q13200 908 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 SCARA3Q6AZY7 606 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 FAM171BQ6P995 826 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 NELFCDQ8IXH7 590 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 TMEM174Q8WUU8 243 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 FAM3CQ92520 227 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 TRMT2BQ96GJ1 504 aaKnown RBP23.96■■□□□ 1.43
CASC3-207ENST00000581849 CEP295NLQ96MC4 621 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 PI4K2AQ9BTU6 479 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 SLC39A2Q9NP94 309 aa23.96■■□□□ 1.43
CASC3-207ENST00000581849 NOL4O94818 638 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 F11P03951 625 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 TNNI1P19237 187 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 WARSP23381 471 aaKnown RBP23.95■■□□□ 1.42
CASC3-207ENST00000581849 ACAT1P24752 427 aaKnown RBP23.95■■□□□ 1.42
CASC3-207ENST00000581849 MAGEA11P43364 429 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 NLRP12P59046 1061 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 KRT85P78386 507 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 CYP4F8P98187 520 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 MAPRE1Q15691 268 aaKnown RBP23.95■■□□□ 1.42
CASC3-207ENST00000581849 C4orf50Q6ZRC1 276 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 CELF5Q8N6W0 485 aaKnown RBP23.95■■□□□ 1.42
CASC3-207ENST00000581849 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 BPIFB1Q8TDL5 484 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 MYRFLQ96LU7 910 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 CHRDQ9H2X0 955 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 SERTAD1Q9UHV2 236 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 GTF3C4Q9UKN8 822 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 CDH9Q9ULB4 789 aa23.95■■□□□ 1.42
CASC3-207ENST00000581849 OBSL1O75147 1896 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 KIF26AQ9ULI4 1882 aaPredicted RBP23.94■■□□□ 1.42
CASC3-207ENST00000581849 CLIC2O15247 247 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 KLRC4O43908 158 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 STAU1O95793 577 aaKnown RBP23.94■■□□□ 1.42
CASC3-207ENST00000581849 LMNAP02545 664 aaKnown RBP23.94■■□□□ 1.42
CASC3-207ENST00000581849 DLATP10515 647 aaKnown RBP23.94■■□□□ 1.42
CASC3-207ENST00000581849 CYP2J2P51589 502 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 TMEM150AQ86TG1 271 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 SPATA2LQ8IUW3 424 aaPredicted RBP23.94■■□□□ 1.42
CASC3-207ENST00000581849 CMTM8Q8IZV2 173 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 KBTBD7Q8WVZ9 684 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 PAGE5Q96GU1 130 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 SLC46A2Q9BY10 475 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 KIF9Q9HAQ2 790 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 PRMT8Q9NR22 394 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms