RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ARMCX3Q9UH62 379 aaPredicted RBP13.51□□□□□ -0.25
SNORD55-201ENST00000581525 MUTYHQ9UIF7 546 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 GTF3C4Q9UKN8 822 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 SLC27A5Q9Y2P5 690 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ATP2C2O75185 946 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 GNA14O95837 355 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 ATF6P18850 670 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 WEE1P30291 646 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 ASPAP45381 313 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 EPHB3P54753 998 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 TNNC1P63316 161 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 INCA1Q0VD86 236 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 SLC5A9Q2M3M2 681 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 IQCEQ6IPM2 695 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 VSTM1Q6UX27 236 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 DNAJB7Q7Z6W7 309 aaPredicted RBP13.5□□□□□ -0.25
SNORD55-201ENST00000581525 UNC93AQ86WB7 457 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 NPAS3Q8IXF0 933 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 FBXL13Q8NEE6 735 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 SEMA4DQ92854 862 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 KCNK12Q9HB15 430 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 CYP3A43Q9HB55 503 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 APOBEC3GQ9HC16 384 aaKnown RBP13.5□□□□□ -0.25
SNORD55-201ENST00000581525 RAB20Q9NX57 234 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 SORCS3Q9UPU3 1222 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 DOCK8Q8NF50 2099 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 DOCK6Q96HP0 2047 aa13.5□□□□□ -0.25
SNORD55-201ENST00000581525 SOBPA7XYQ1 873 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 NRG2O14511 850 aaPredicted RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 P4HA2O15460 535 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 HCRTO43612 131 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 FGF19O95750 216 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 P4HA1P13674 534 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 HMGA1P17096 107 aaKnown RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 PTPN1P18031 435 aaKnown RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 ACAT1P24752 427 aaKnown RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 CDH8P55286 799 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 HTR4Q13639 388 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 CYP4A22Q5TCH4 519 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 IRF2BP1Q8IU81 584 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 TRIM59Q8IWR1 403 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 CORO1BQ9BR76 489 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 NUP62CLQ9H1M0 184 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 TRPV4Q9HBA0 871 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
SNORD55-201ENST00000581525 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 MRPS23Q9Y3D9 190 aaKnown RBP13.49□□□□□ -0.25
SNORD55-201ENST00000581525 GOLGA6L22H0YM25 854 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 LRRN2O75325 713 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 CYP2F1P24903 491 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 MXI1P50539 228 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 NLRP12P59046 1061 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 RPL10AP62906 217 aaKnown RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 TDGQ13569 410 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 CBWD3Q5JTY5 395 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 CBWD5Q5RIA9 395 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 SPOPLQ6IQ16 392 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 PAQR9Q6ZVX9 377 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 GAREM2Q75VX8 874 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 SLC44A3Q8N4M1 653 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 OR6B3Q8NGW1 331 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 TRMT2BQ96GJ1 504 aaKnown RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 PCED1BQ96HM7 432 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 SRRTQ9BXP5 876 aaKnown RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
SNORD55-201ENST00000581525 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
SNORD55-201ENST00000581525 A8MXQ7 604 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 SOAT2O75908 522 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 NOL4O94818 638 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 FGFR1OPO95684 399 aaKnown RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 F11P03951 625 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 ASGR2P07307 311 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 CSH1P0DML2 217 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 CSH2P0DML3 217 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 CEBPBP17676 345 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms