RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PRICKLE2Q7Z3G6 844 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 EFCAB13Q8IY85 973 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 IL17RCQ8NAC3 791 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 CCDC43Q96MW1 224 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 FNDC3AQ9Y2H6 1198 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 NOTCH2Q04721 2471 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 SCAMP3O14828 347 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 ADAM23O75077 832 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 DGAT1O75907 488 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 FGF19O95750 216 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 CHRM1P11229 460 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 CDC25CP30307 473 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 DPP6P42658 865 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 IFNAR2P48551 515 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 GPR17Q13304 367 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 FAM187BQ17R55 369 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 EML3Q32P44 896 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 DCAF4L1Q3SXM0 396 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 ITIH5Q86UX2 942 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 GALNT15Q8N3T1 639 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 TRPC7Q9HCX4 862 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 ASB3Q9Y575 518 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 PTPRDP23468 1912 aa15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 HELZP42694 1942 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 SPTAN1Q13813 2472 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-213ENST00000580446 RRP8O43159 456 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 DKK1O94907 266 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SLITRK3O94933 977 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 HSPA4P34932 840 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC6A11P48066 632 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SPAG1Q07617 926 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 TAF12Q16514 161 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 MGAT5BQ3V5L5 792 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SPDYCQ5MJ68 293 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 BAHD1Q8TBE0 780 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 RHBDD1Q8TEB9 315 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 OSCP1Q8WVF1 389 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 HAS1Q92839 578 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 EXOC4Q96A65 974 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC22A12Q96S37 553 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC26A6Q9BXS9 759 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 KCNMB3Q9NPA1 279 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 CYP8B1Q9UNU6 501 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 AK5Q9Y6K8 562 aa15.33■□□□□ 0.04
CSNK1D-213ENST00000580446 ACKR2O00590 384 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 IGHDP01880 384 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 WASP42768 502 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 RARRES1P49788 294 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 TLE3Q04726 772 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 GAB4Q2WGN9 574 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 TTC22Q5TAA0 569 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 SDHAF4Q5VUM1 108 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 PPP4R3AQ6IN85 833 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 ALKAL1Q6UXT8 129 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 CCDC148Q8NFR7 591 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC38A7Q9NVC3 462 aa15.32■□□□□ 0.04
CSNK1D-213ENST00000580446 IGHV1OR15-9A0A0B4J2B8 117 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 ERVH48-1M5A8F1 160 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 CILPO75339 1184 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 OAZ2O95190 189 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 GPR15P49685 360 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 NLRP12P59046 1061 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 KDSRQ06136 332 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 VEPH1Q14D04 833 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 ZNF77Q15935 545 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 SEZ6Q53EL9 994 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 RABEPKQ7Z6M1 372 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 ZCCHC9Q8N567 271 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 OR10T2Q8NGX3 314 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 NXPE2Q96DL1 559 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 NAF1Q96HR8 494 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 EIF2AK1Q9BQI3 630 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC6A17Q9H1V8 727 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 CDT1Q9H211 546 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 GAREM1Q9H706 876 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 CPNE5Q9HCH3 593 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 COL6A6A6NMZ7 2263 aa15.31■□□□□ 0.04
CSNK1D-213ENST00000580446 A0A1W2PQD8 194 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 CAPN8A6NHC0 703 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 KRT38O76015 456 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 F11P03951 625 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 NTRK1P04629 796 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 C6P13671 934 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 CPA1P15085 419 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 GABRG2P18507 467 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms