RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 HDAC7Q8WUI4 952 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TSPYL2Q9H2G4 693 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 RSAD1Q9HA92 442 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SQORQ9Y6N5 450 aa15.7■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCDC66A2RUB6 948 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GOLGA8SH3BPF8 625 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 DNM1LO00429 736 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SEC31AO94979 1220 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LMO2P25791 158 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CLCNKBP51801 687 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 OGDHQ02218 1023 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 C8orf74Q6P047 294 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TTC30AQ86WT1 665 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ADGRF2Q8IZF7 708 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 APPL2Q8NEU8 664 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LINC01599Q8WXQ3 324 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 KRT12Q99456 494 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 BEGAINQ9BUH8 593 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ZNF446Q9NWS9 450 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 KIAA1257Q9ULG3 409 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 STRIP2Q9ULQ0 834 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TTC7AQ9ULT0 858 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TARSL2A2RTX5 802 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TMEM191CA6NGB0 347 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PODXLO00592 558 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ZMYND10O75800 440 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PFKMP08237 780 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PDGFRBP09619 1106 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 XYLT1Q86Y38 959 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SYNCQ9H7C4 482 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 DMGDHQ9UI17 866 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCDC151A5D8V7 595 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TULP2O00295 520 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 HUS1O60921 280 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 POMCP01189 267 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PYGMP11217 842 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCDC130P13994 396 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SLC1A1P43005 524 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TAS2R40P59535 323 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SLC7A5Q01650 507 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 STILQ15468 1287 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LONRF2Q1L5Z9 754 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CC2D1AQ6P1N0 951 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 WDR93Q6P2C0 686 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 DCUN1D2Q6PH85 259 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ADAT2Q7Z6V5 191 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 KLHL7Q8IXQ5 586 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 FAM126BQ8IXS8 530 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TOP6BLQ8N6T0 577 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 C18orf8Q96DM3 657 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 HINFPQ9BQA5 517 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SNX25Q9H3E2 840 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PLEKHA4Q9H4M7 779 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 METTL5Q9NRN9 209 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 INPP5FQ9Y2H2 1132 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PIK3R2O00459 728 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 KRIT1O00522 736 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CYB561D2O14569 222 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GNL1P36915 607 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CDK7P50613 346 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 RWDD2BP57060 319 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 BRD3Q15059 726 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCDC142Q17RM4 750 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PKDCCQ504Y2 493 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SEL1L2Q5TEA6 688 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCDC70Q6NSX1 233 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ZNF598Q86UK7 904 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 RTN4RL1Q86UN2 441 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 JOSD2Q8TAC2 188 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 DDX47Q9H0S4 455 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ST7Q9NRC1 585 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 IP6K2Q9UHH9 426 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 E5RJQ4 531 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 CCL5P13501 91 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TCF4P15884 667 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 MAN1A1P33908 653 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GJC1P36383 396 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 GABRB2P47870 512 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 RGS7P49802 495 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 WSCD1Q658N2 575 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ARHGAP17Q68EM7 881 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 TMCO3Q6UWJ1 677 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 IPO4Q8TEX9 1081 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 PGBD4Q96DM1 585 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 SENP8Q96LD8 212 aa15.67■□□□□ 0.1
CDK5RAP3-218ENST00000580391 ADORA2BP29275 332 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms