RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 EPHA7Q15375 998 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 TAF5Q15542 800 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 MUM1Q2TAK8 710 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 SLC45A4Q5BKX6 768 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CFAP58Q5T655 872 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CCDC30Q5VVM6 783 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 SWSAP1Q6NVH7 229 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CXorf67Q86X51 503 aaPredicted RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 TMTC1Q8IUR5 882 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 NLGN4XQ8N0W4 816 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 LCORLQ8N3X6 602 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CCDC33Q8N5R6 958 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ATG16L2Q8NAA4 619 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 UHMK1Q8TAS1 419 aaKnown RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CENPIQ92674 756 aaPredicted RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ZNF566Q969W8 418 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 MAML3Q96JK9 1138 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 TIGD1Q96MW7 591 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 TREX2Q9BQ50 279 aaPredicted RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 SORBS1Q9BX66 1292 aaKnown RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 C22orf23Q9BZE7 217 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 MAGEH1Q9H213 219 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 SERHL2Q9H4I8 314 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 OLA1Q9NTK5 396 aaKnown RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ANKEF1Q9NU02 776 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 NSMCE4AQ9NXX6 385 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 LRFN1Q9P244 771 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 PPARGC1AQ9UBK2 798 aaKnown RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 GRHPRQ9UBQ7 328 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ZNF70Q9UC06 446 aaPredicted RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 CDC42EP3Q9UKI2 254 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ACAD8Q9UKU7 415 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 ISY1Q9ULR0 285 aaKnown RBP3.56□□□□□ -1.84
KPNB1-208ENST00000580019 EDARQ9UNE0 448 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 PRDM2Q13029 1718 aa3.56□□□□□ -1.84
KPNB1-208ENST00000580019 WDR97A6NE52 1622 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 PRG4Q92954 1404 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 A0A087X0M5 115 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CENPVL1A0A0U1RR11 272 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 A0A1B0GX30 115 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 A0A1W2PPL8 197 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 GRXCR1A8MXD5 290 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 SCDO00767 359 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 TOR1BO14657 336 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 HOXC11O43248 304 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 HTRA2O43464 458 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 DHX16O60231 1041 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 AMY2AP04746 511 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 HNRNPCP07910 306 aaKnown RBP eCLIP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 TSHRP16473 764 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 AMY2BP19961 511 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 PTX3P26022 381 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CNTFP26441 200 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 EEF1GP26641 437 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 OAS2P29728 719 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 FNTBP49356 437 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ITGA8P53708 1063 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 MANFP55145 182 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ZBED6P86452 979 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 DBPQ10586 325 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 MOGSQ13724 837 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 MPEG1Q2M385 716 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 FBXO47Q5MNV8 452 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 GPATCH4Q5T3I0 446 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ANKRD45Q5TZF3 282 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CCDC62Q6P9F0 684 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 OTOP2Q7RTS6 562 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 LIX1LQ8IVB5 337 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 TSPYL6Q8N831 410 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 C7orf31Q8N865 590 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ADAMTS18Q8TE60 1221 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 UCMAQ8WVF2 138 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 RSAD2Q8WXG1 361 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ASB12Q8WXK4 309 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 RTF1Q92541 710 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 DLG3Q92796 817 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 GOLGA1Q92805 767 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 FATE1Q969F0 183 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 HDAC10Q969S8 669 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 ZBTB9Q96C00 473 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 MTFMTQ96DP5 389 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 NT5C1BQ96P26 610 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CHCHD6Q9BRQ6 235 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CENPOQ9BU64 300 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CNPPD1Q9BV87 410 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 JAM3Q9BX67 310 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 STK31Q9BXU1 1019 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 STK33Q9BYT3 514 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CCDC68Q9H2F9 335 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CDIP1Q9H305 208 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 BRD9Q9H8M2 597 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 MAGED1Q9Y5V3 778 aaPredicted RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 NR2E3Q9Y5X4 410 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 B3GALT1Q9Y5Z6 326 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 CFAP20Q9Y6A4 193 aaKnown RBP3.55□□□□□ -1.84
KPNB1-208ENST00000580019 WIZO95785 1651 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 KIF21BO75037 1637 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 SHROOM2Q13796 1616 aa3.55□□□□□ -1.84
KPNB1-208ENST00000580019 USP19O94966 1318 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms