RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 TDP1Q9NUW8 608 aa11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 ABI2Q9NYB9 513 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 SEL1LQ9UBV2 794 aa11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 PCDHB5Q9Y5E4 795 aa11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-210ENST00000579308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 GDF9O60383 454 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 ADRB1P08588 477 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 PNPLA4P41247 253 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 RAP1GAPP47736 663 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 ZNF268Q14587 947 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 TAF12Q16514 161 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 NFE2Q16621 373 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 SV2CQ496J9 727 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 TRIM68Q6AZZ1 485 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 C1orf127Q8N9H9 656 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 LEO1Q8WVC0 666 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 LOXL4Q96JB6 756 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 MYRFLQ96LU7 910 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 FAM213AQ9BRX8 229 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 PI4K2AQ9BTU6 479 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 ABCB6Q9NP58 842 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 STK17AQ9UEE5 414 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 FBXO2Q9UK22 296 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 L1RE1Q9UN81 338 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 SRPRBQ9Y5M8 271 aaKnown RBP11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 TICRRQ7Z2Z1 1910 aa11.47□□□□□ -0.57
CSNK1D-210ENST00000579308 FRMD3A2A2Y4 597 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 GABRDO14764 452 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TM4SF5O14894 197 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 FOXD2O60548 495 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TADA3O75528 432 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 NOL4O94818 638 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 CSH1P0DML2 217 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 CSH2P0DML3 217 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 ARSAP15289 507 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 GAP43P17677 238 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 CYP2F1P24903 491 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 POLR2BP30876 1174 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 AVPR1AP37288 418 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 GALK1P51570 392 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 CASP5P51878 434 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TFAMQ00059 246 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TSPY1Q01534 308 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 DDR2Q16832 855 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 SDHAF4Q5VUM1 108 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 LIMS2Q7Z4I7 341 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 BRSK2Q8IWQ3 736 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TMEM86AQ8N2M4 240 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 GAB3Q8WWW8 586 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 TRMT2BQ96GJ1 504 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 ACCSQ96QU6 501 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 KIF9Q9HAQ2 790 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 OLFML3Q9NRN5 406 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.57
CSNK1D-210ENST00000579308 KMT2BQ9UMN6 2715 aaPredicted RBP11.46□□□□□ -0.58
CSNK1D-210ENST00000579308 CACNA1BQ00975 2339 aa11.46□□□□□ -0.58
CSNK1D-210ENST00000579308 AXIN1O15169 862 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 ATG13O75143 517 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 EGFP01133 1207 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 ITGB3P05106 788 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 GARTP22102 1010 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 PXNP49023 591 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 BFSP1Q12934 665 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CUL4AQ13619 759 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 PDGFRLQ15198 375 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 PPM1JQ5JR12 505 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 RRAGBQ5VZM2 374 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 NAIF1Q69YI7 327 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CEP68Q76N32 757 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 SV2BQ7L1I2 683 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CACNA2D4Q7Z3S7 1137 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 OSTM1Q86WC4 334 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 SPATA18Q8TC71 538 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 MRPS31Q92665 395 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 SAAL1Q96ER3 474 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 FAM84AQ96KN4 292 aa11.45□□□□□ -0.58
CSNK1D-210ENST00000579308 CLIC6Q96NY7 704 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms