RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 NR1I3Q14994 352 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 SYCP1Q15431 976 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 MDH1BQ5I0G3 518 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 KLHDC7AQ5VTJ3 777 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 ACOT1Q86TX2 421 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 SPATA2LQ8IUW3 424 aaPredicted RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 TMEM176AQ96HP8 235 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 HEXIM2Q96MH2 286 aaKnown RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 PLCB1Q9NQ66 1216 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 TMLHEQ9NVH6 421 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 DNAJC12Q9UKB3 198 aa16.58■□□□□ 0.24
SLC6A4-205ENST00000579221 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 TEX33O43247 280 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ZMYND10O75800 440 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 SEC24AO95486 1093 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 CYP27A1Q02318 531 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 APBA1Q02410 837 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 DUSP4Q13115 394 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ARHGAP44Q17R89 818 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ZNF394Q53GI3 561 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 PPM1LQ5SGD2 360 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 GJB7Q6PEY0 223 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 UBR7Q8N806 425 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 KAT5Q92993 513 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 KREMEN1Q96MU8 473 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ELOVL4Q9GZR5 314 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 UBE2ZQ9H832 354 aaPredicted RBP16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 SFXN1Q9H9B4 322 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ZDHHC7Q9NXF8 308 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 ABI2Q9NYB9 513 aaPredicted RBP16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 CLEC1BQ9P126 229 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 KIAA1257Q9ULG3 409 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 SLC27A5Q9Y2P5 690 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 DAAM1Q9Y4D1 1078 aa16.57■□□□□ 0.24
SLC6A4-205ENST00000579221 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 ATP8B3O60423 1300 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 TPM3P06753 285 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 C8AP07357 584 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 ACO1P21399 889 aaKnown RBP16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 RFX1P22670 979 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 LTBRP36941 435 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 ALDH1A3P47895 512 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 RAD23BP54727 409 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 ORC1Q13415 861 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 MGAT5BQ3V5L5 792 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 NEK11Q8NG66 645 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 SLC7A14Q8TBB6 771 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 TWNKQ96RR1 684 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 LPIN3Q9BQK8 851 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 MED10Q9BTT4 135 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 IFNKQ9P0W0 207 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 HMGXB4Q9UGU5 601 aa16.56■□□□□ 0.24
SLC6A4-205ENST00000579221 A0A1W2PQC6 194 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 TBX10O75333 385 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 VNN2O95498 520 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 LRG1P02750 347 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 PAEPP09466 180 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 KRT5P13647 590 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 UCHL3P15374 230 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 HOXA9P31269 272 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 KLK7P49862 253 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 PLD1Q13393 1074 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CFAP221Q4G0U5 840 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 SYCE2Q6PIF2 218 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 C12orf76Q8N812 135 aaPredicted RBP16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 SLC4A11Q8NBS3 891 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CMASQ8NFW8 434 aaPredicted RBP16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 MYLPFQ96A32 169 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CYFIP2Q96F07 1278 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 FAM207AQ9NSI2 230 aaPredicted RBP16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CD207Q9UJ71 328 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
SLC6A4-205ENST00000579221 PRRC2BQ5JSZ5 2229 aaKnown RBP16.54■□□□□ 0.24
SLC6A4-205ENST00000579221 XYLBO75191 536 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms