RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 SLC14A1Q13336 389 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 MTF1Q14872 753 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 EPHA7Q15375 998 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 NPY5RQ15761 445 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 INF2Q27J81 1249 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 XKR4Q5GH76 650 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 CREB3L3Q68CJ9 461 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 CPA6Q8N4T0 437 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 PDCD7Q8N8D1 485 aaKnown RBP12.09□□□□□ -0.47
GGA3-206ENST00000578773 PIGOQ8TEQ8 1089 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 HSPA12BQ96MM6 686 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 PNMA5Q96PV4 448 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
GGA3-206ENST00000578773 LINC00597Q9H2U6 94 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 TDP1Q9NUW8 608 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 MAFFQ9ULX9 164 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
GGA3-206ENST00000578773 TEX51A0A1B0GUA7 166 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 B8ZZF3 427 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 M0R2N6 131 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 TADA3O75528 432 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 SLC6A11P48066 632 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 RARRES1P49788 294 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 EXOSC10Q01780 885 aaKnown RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 BFSP1Q12934 665 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 GPR17Q13304 367 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 ZNF77Q15935 545 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 TAF1BQ53T94 588 aaPredicted RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 TTC22Q5TAA0 569 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 DUS2Q9NX74 493 aaKnown RBP12.08□□□□□ -0.48
GGA3-206ENST00000578773 MYH10P35580 1976 aa12.08□□□□□ -0.48
GGA3-206ENST00000578773 NUMA1Q14980 2115 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 AP5Z1O43299 807 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 MARCH6O60337 910 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
GGA3-206ENST00000578773 DGAT1O75907 488 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 F11P03951 625 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 SYPP08247 313 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 CPA1P15085 419 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 GABRG2P18507 467 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 AVPR1AP37288 418 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 GPR15P49685 360 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 YWHAHQ04917 246 aaPredicted RBP12.07□□□□□ -0.48
GGA3-206ENST00000578773 PDGFRLQ15198 375 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 DCAF4L1Q3SXM0 396 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 C12orf40Q86WS4 652 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 EFCAB13Q8IY85 973 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 OR10T2Q8NGX3 314 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 BICD2Q8TD16 824 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 CDT1Q9H211 546 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 CALCOCO1Q9P1Z2 691 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 ASB3Q9Y575 518 aa12.07□□□□□ -0.48
GGA3-206ENST00000578773 ACKR2O00590 384 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 SCAMP3O14828 347 aaKnown RBP12.06□□□□□ -0.48
GGA3-206ENST00000578773 PPEF2O14830 753 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 TRIM66O15016 1216 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 KRT38O76015 456 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 OAZ2O95190 189 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 HLA-EP13747 358 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
GGA3-206ENST00000578773 CDC25CP30307 473 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 GUCY2FP51841 1108 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 NLRP12P59046 1061 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 AMPD2Q01433 879 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 TLE3Q04726 772 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 SPAG1Q07617 926 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 CCDC173Q0VFZ6 552 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 USP4Q13107 963 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
GGA3-206ENST00000578773 ADCK5Q3MIX3 580 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 SEZ6Q53EL9 994 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
GGA3-206ENST00000578773 LRRC69Q6ZNQ3 347 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 ZBTB8OSQ8IWT0 167 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 OSCP1Q8WVF1 389 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 RUFY2Q8WXA3 655 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 EIF2AK1Q9BQI3 630 aaKnown RBP12.06□□□□□ -0.48
GGA3-206ENST00000578773 SLC6A17Q9H1V8 727 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 CYP8B1Q9UNU6 501 aa12.06□□□□□ -0.48
GGA3-206ENST00000578773 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.06□□□□□ -0.48
GGA3-206ENST00000578773 DOPEY1Q5JWR5 2465 aa12.05□□□□□ -0.48
GGA3-206ENST00000578773 MYH11P35749 1972 aa12.05□□□□□ -0.48
GGA3-206ENST00000578773 M0QZQ0 153 aa12.05□□□□□ -0.48
GGA3-206ENST00000578773 ERVH48-1M5A8F1 160 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms