RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 SGSM1Q2NKQ1 1148 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 NPAS3Q8IXF0 933 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 GPR152Q8TDT2 470 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 RSAD2Q8WXG1 361 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 EDAQ92838 391 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 TCEAL4Q96EI5 215 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 XYLT2Q9H1B5 865 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 NUP62CLQ9H1M0 184 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 DNAJC25Q9H1X3 360 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 SMOC2Q9H3U7 446 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 CLSTN2Q9H4D0 955 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 KIAA1468Q9P260 1216 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 IGSF9Q9P2J2 1179 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 ZFP37Q9Y6Q3 630 aaPredicted RBP20.84■□□□□ 0.93
SS18-209ENST00000578595 GREB1Q4ZG55 1949 aa20.84■□□□□ 0.93
SS18-209ENST00000578595 GABRDO14764 452 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 STX10O60499 249 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 ATP2C2O75185 946 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 STAU1O95793 577 aaKnown RBP20.83■□□□□ 0.93
SS18-209ENST00000578595 HAPLN1P10915 354 aaPredicted RBP20.83■□□□□ 0.93
SS18-209ENST00000578595 GJA1P17302 382 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 PAK1Q13153 545 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 MDH1BQ5I0G3 518 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 C1orf220Q5T0J3 134 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 SPOPLQ6IQ16 392 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 C4orf50Q6ZRC1 276 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 SCN4BQ8IWT1 228 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 LEMD2Q8NC56 503 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 MYLPFQ96A32 169 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 GCNAQ96QF7 691 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 HSFX1Q9UBD0 423 aa20.83■□□□□ 0.93
SS18-209ENST00000578595 NUP210Q8TEM1 1887 aaPredicted RBP20.83■□□□□ 0.92
SS18-209ENST00000578595 MYBPHLA2RUH7 354 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TACC1O75410 805 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 ATF6P18850 670 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 BMP6P22004 513 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 CYP2F1P24903 491 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 CDH8P55286 799 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TDGQ13569 410 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 MAPRE1Q15691 268 aaKnown RBP20.82■□□□□ 0.92
SS18-209ENST00000578595 SDHAF4Q5VUM1 108 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TRIM67Q6ZTA4 783 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 MTSS1LQ765P7 747 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TRIML1Q8N9V2 468 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TAS1R2Q8TE23 839 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TAF4BQ92750 862 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 PSMG2Q969U7 264 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 TMEM8AQ9HCN3 771 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 ARMCX3Q9UH62 379 aaPredicted RBP20.82■□□□□ 0.92
SS18-209ENST00000578595 MAGED2Q9UNF1 606 aaPredicted RBP20.82■□□□□ 0.92
SS18-209ENST00000578595 ASB3Q9Y575 518 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 NUMBLQ9Y6R0 609 aa20.82■□□□□ 0.92
SS18-209ENST00000578595 A0A1W2PRU2 124 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 PPP1R3GB7ZBB8 358 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 GABRR2P28476 465 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 CCR2P41597 374 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 GPR15P49685 360 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 RPL10AP62906 217 aaKnown RBP20.81■□□□□ 0.92
SS18-209ENST00000578595 NOP14P78316 857 aaKnown RBP20.81■□□□□ 0.92
SS18-209ENST00000578595 SIGLEC14Q08ET2 396 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 TEAD2Q15562 447 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 PRSS36Q5K4E3 855 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 KRT39Q6A163 491 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 DNAJB7Q7Z6W7 309 aaPredicted RBP20.81■□□□□ 0.92
SS18-209ENST00000578595 UBALD2Q8IYN6 164 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 STKLD1Q8NE28 680 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 CRTAC1Q9NQ79 661 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 AVENQ9NQS1 362 aaPredicted RBP20.81■□□□□ 0.92
SS18-209ENST00000578595 LMBRD1Q9NUN5 540 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 MAGEC2Q9UBF1 373 aaPredicted RBP20.81■□□□□ 0.92
SS18-209ENST00000578595 FBXL21Q9UKT6 434 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 MYO16Q9Y6X6 1858 aa20.81■□□□□ 0.92
SS18-209ENST00000578595 ZDBF2Q9HCK1 2354 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 TMEM221A6NGB7 291 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 M0R296 226 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 ASS1P00966 412 aaKnown RBP20.8■□□□□ 0.92
SS18-209ENST00000578595 ENPEPQ07075 957 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 HTR4Q13639 388 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 DDR2Q16832 855 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 PARM1Q6UWI2 310 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 LIMS2Q7Z4I7 341 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 CREBRFQ8IUR6 639 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 CEP63Q96MT8 703 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 KXD1Q9BQD3 176 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 LRFN3Q9BTN0 628 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 MED10Q9BTT4 135 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 ATXN3LQ9H3M9 355 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 DPEP3Q9H4B8 488 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 VRTNQ9H8Y1 702 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 ABCB6Q9NP58 842 aa20.8■□□□□ 0.92
SS18-209ENST00000578595 ANAPC1Q9H1A4 1944 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 NARSO43776 548 aaKnown RBP20.79■□□□□ 0.92
SS18-209ENST00000578595 GPR37L1O60883 481 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 TRIM21P19474 475 aaKnown RBP20.79■□□□□ 0.92
SS18-209ENST00000578595 BDNFP23560 247 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 ANXA13P27216 316 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 GTF2H1P32780 548 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 ARHGAP15Q53QZ3 475 aa20.79■□□□□ 0.92
SS18-209ENST00000578595 TTI2Q6NXR4 508 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms