RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ATXN3LQ9H3M9 355 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 IL21Q9HBE4 155 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 TRAF3IP3Q9Y228 551 aa24.62■■□□□ 1.53
VAPA-205ENST00000578314 RFX1P22670 979 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 WARSP23381 471 aaKnown RBP24.61■■□□□ 1.53
VAPA-205ENST00000578314 GABRR2P28476 465 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 VIPR2P41587 438 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 AP3M2P53677 418 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 KCNB1Q14721 858 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 MLF2Q15773 248 aaPredicted RBP24.61■■□□□ 1.53
VAPA-205ENST00000578314 CFAP221Q4G0U5 840 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 GIPC2Q8TF65 315 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 MKNK1Q9BUB5 465 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 TRMT61BQ9BVS5 477 aaKnown RBP24.61■■□□□ 1.53
VAPA-205ENST00000578314 SLITRK6Q9H5Y7 841 aa24.61■■□□□ 1.53
VAPA-205ENST00000578314 MYBPHLA2RUH7 354 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 HCRTO43612 131 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 TACC1O75410 805 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 NR3C1P04150 777 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 PSMC3P17980 439 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 LMO2P25791 158 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 WEE1P30291 646 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 CDC25CP30307 473 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 ATICP31939 592 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 CASP4P49662 377 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 STXBP5Q5T5C0 1151 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 VITQ6UXI7 678 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 MFSD6LQ8IWD5 586 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 DTWD2Q8NBA8 298 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 DEPDC1BQ8WUY9 529 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 DNASE1L2Q92874 299 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 FUBP3Q96I24 572 aaKnown RBP eCLIP24.6■■□□□ 1.53
VAPA-205ENST00000578314 MMS19Q96T76 1030 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 XYLT2Q9H1B5 865 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 CDH9Q9ULB4 789 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 SIT1Q9Y3P8 196 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 MYO15AQ9UKN7 3530 aa24.6■■□□□ 1.53
VAPA-205ENST00000578314 KANSL1LA0AUZ9 987 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 LRRIQ3A6PVS8 624 aaPredicted RBP24.59■■□□□ 1.53
VAPA-205ENST00000578314 CALUO43852 315 aaPredicted RBP24.59■■□□□ 1.53
VAPA-205ENST00000578314 HMGA1P17096 107 aaKnown RBP24.59■■□□□ 1.53
VAPA-205ENST00000578314 CYP2F1P24903 491 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 RPL10AP62906 217 aaKnown RBP24.59■■□□□ 1.53
VAPA-205ENST00000578314 TRPC3Q13507 836 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 GRM2Q14416 872 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 TAF12Q16514 161 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 NFIL3Q16649 462 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 WDR72Q3MJ13 1102 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 ARHGAP15Q53QZ3 475 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 FMR1NBQ8N0W7 255 aaPredicted RBP24.59■■□□□ 1.53
VAPA-205ENST00000578314 CCDC34Q96HJ3 373 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 TRPV5Q9NQA5 729 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 DLGAP2Q9P1A6 1054 aa24.59■■□□□ 1.53
VAPA-205ENST00000578314 HEPACAM2A8MVW5 462 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 C4BPAP04003 597 aaKnown RBP24.58■■□□□ 1.53
VAPA-205ENST00000578314 GPR15P49685 360 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 MYL6P60660 151 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 GPR158Q5T848 1215 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 SPATA2LQ8IUW3 424 aaPredicted RBP24.58■■□□□ 1.53
VAPA-205ENST00000578314 ARID3BQ8IVW6 561 aaPredicted RBP24.58■■□□□ 1.53
VAPA-205ENST00000578314 GUF1Q8N442 669 aaKnown RBP24.58■■□□□ 1.53
VAPA-205ENST00000578314 PJA1Q8NG27 643 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 IRF7Q92985 503 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 SYT15Q9BQS2 421 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 TASP1Q9H6P5 420 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 BRD9Q9H8M2 597 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 VRTNQ9H8Y1 702 aa24.58■■□□□ 1.53
VAPA-205ENST00000578314 TCHHQ07283 1943 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 PHACTR2O75167 634 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 ATP2C2O75185 946 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 F11P03951 625 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 CSH1P0DML2 217 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 CSH2P0DML3 217 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 GNL1P36915 607 aaPredicted RBP24.57■■□□□ 1.52
VAPA-205ENST00000578314 MAGEA11P43364 429 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 MAPRE1Q15691 268 aaKnown RBP24.57■■□□□ 1.52
VAPA-205ENST00000578314 DDR2Q16832 855 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 CCDC142Q17RM4 750 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 TDRD10Q5VZ19 366 aaKnown RBP24.57■■□□□ 1.52
VAPA-205ENST00000578314 C4orf50Q6ZRC1 276 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 TMEM150AQ86TG1 271 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 ENGASEQ8NFI3 743 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 TMC2Q8TDI7 906 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 SYAP1Q96A49 352 aaPredicted RBP24.57■■□□□ 1.52
VAPA-205ENST00000578314 RSPRY1Q96DX4 576 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 MRPL45Q9BRJ2 306 aaKnown RBP24.57■■□□□ 1.52
VAPA-205ENST00000578314 OSBPL6Q9BZF3 934 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 FOXQ1Q9C009 403 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 CRTAC1Q9NQ79 661 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 OBP2AQ9NY56 170 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 ZMYM5Q9UJ78 669 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 FRMD4BQ9Y2L6 1034 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 NCANO14594 1321 aa24.57■■□□□ 1.52
VAPA-205ENST00000578314 ZFHX2Q9C0A1 2572 aaPredicted RBP24.56■■□□□ 1.52
VAPA-205ENST00000578314 GOLGA6L4A6NEF3 574 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 PROB1E7EW31 1015 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 MAPK13O15264 365 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 GFRA3O60609 400 aa24.56■■□□□ 1.52
VAPA-205ENST00000578314 DCNP07585 359 aaKnown RBP24.56■■□□□ 1.52
VAPA-205ENST00000578314 PDGFRBP09619 1106 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms