RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 LEMD2Q8NC56 503 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 OR6B3Q8NGW1 331 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 FGF13Q92913 245 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 SLC35C1Q96A29 364 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 MED15Q96RN5 788 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 SYT15Q9BQS2 421 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 SDCBP2Q9H190 292 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 SNX25Q9H3E2 840 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 SMYD3Q9H7B4 428 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 CRTAC1Q9NQ79 661 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 RWDD2AQ9UIY3 292 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 CDH7Q9ULB5 785 aa20.66■□□□□ 0.9
SS18-208ENST00000577751 LRRN2O75325 713 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 P4HA1P13674 534 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 ATF6P18850 670 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 MXI1P50539 228 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 PTPN21Q16825 1174 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 SPOPLQ6IQ16 392 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 DNAJB7Q7Z6W7 309 aaPredicted RBP20.65■□□□□ 0.9
SS18-208ENST00000577751 HS6ST3Q8IZP7 471 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 PSMG2Q969U7 264 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 FUBP3Q96I24 572 aaKnown RBP eCLIP20.65■□□□□ 0.9
SS18-208ENST00000577751 SEPT5Q99719 369 aaPredicted RBP20.65■□□□□ 0.9
SS18-208ENST00000577751 PI4K2AQ9BTU6 479 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 APOBEC3GQ9HC16 384 aaKnown RBP20.65■□□□□ 0.9
SS18-208ENST00000577751 COQ4Q9Y3A0 265 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 MRPS23Q9Y3D9 190 aaKnown RBP20.65■□□□□ 0.9
SS18-208ENST00000577751 PTPRDP23468 1912 aa20.65■□□□□ 0.9
SS18-208ENST00000577751 ZNF197O14709 1029 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 CCR2P41597 374 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 ASPAP45381 313 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 MARSP56192 900 aaKnown RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 PSMC1P62191 440 aaKnown RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 MAPRE1Q15691 268 aaKnown RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 CBWD6Q4V339 395 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 DCAF17Q5H9S7 520 aaPredicted RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 CBWD3Q5JTY5 395 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 CBWD5Q5RIA9 395 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 TCERG1LQ5VWI1 586 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 POTEHQ6S545 545 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 PDZD4Q76G19 769 aaPredicted RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 TMC8Q8IU68 726 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 NPAS3Q8IXF0 933 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 FBXL13Q8NEE6 735 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 MYCBPAPQ8TBZ2 947 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 SEMA4DQ92854 862 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 FAXDC2Q96IV6 333 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 SRRTQ9BXP5 876 aaKnown RBP20.64■□□□□ 0.89
SS18-208ENST00000577751 BCO2Q9BYV7 579 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 KCNK12Q9HB15 430 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 ASAH2Q9NR71 780 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 RAB20Q9NX57 234 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 IGSF9Q9P2J2 1179 aa20.64■□□□□ 0.89
SS18-208ENST00000577751 A8MXQ7 604 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 ANHXE9PGG2 379 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 MOSPD3O75425 235 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 ASGR2P07307 311 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 CYP2F1P24903 491 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 RAP1GAPP47736 663 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 NOP14P78316 857 aaKnown RBP20.63■□□□□ 0.89
SS18-208ENST00000577751 CYP4A22Q5TCH4 519 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 C4orf50Q6ZRC1 276 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 RBM43Q6ZSC3 357 aaKnown RBP20.63■□□□□ 0.89
SS18-208ENST00000577751 ITIH5Q86UX2 942 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 SPATA2LQ8IUW3 424 aaPredicted RBP20.63■□□□□ 0.89
SS18-208ENST00000577751 EDAQ92838 391 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 NXPE3Q969Y0 559 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 TCEAL4Q96EI5 215 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 PCED1BQ96HM7 432 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 IMPG2Q9BZV3 1241 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 DPEP3Q9H4B8 488 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 SORCS3Q9UPU3 1222 aa20.63■□□□□ 0.89
SS18-208ENST00000577751 NRG2O14511 850 aaPredicted RBP20.62■□□□□ 0.89
SS18-208ENST00000577751 PMM2O15305 246 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 GNA14O95837 355 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 PTPN1P18031 435 aaKnown RBP20.62■□□□□ 0.89
SS18-208ENST00000577751 MAGEA11P43364 429 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 NLRP12P59046 1061 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 ZXDAP98168 799 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 CCDC40Q4G0X9 1142 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 SCARA5Q6ZMJ2 495 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 B3GALNT2Q8NCR0 500 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 MYLPFQ96A32 169 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 GDE1Q9NZC3 331 aa20.62■□□□□ 0.89
SS18-208ENST00000577751 MAGEC2Q9UBF1 373 aaPredicted RBP20.62■□□□□ 0.89
SS18-208ENST00000577751 CLSTN1O94985 981 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 FGFR1OPO95684 399 aaKnown RBP20.61■□□□□ 0.89
SS18-208ENST00000577751 MYL4P12829 197 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 CEBPBP17676 345 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 GPR15P49685 360 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 RPL10AP62906 217 aaKnown RBP20.61■□□□□ 0.89
SS18-208ENST00000577751 VEPH1Q14D04 833 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 DPCR1Q3MIW9 517 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 UNC93AQ86WB7 457 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 TRIM59Q8IWR1 403 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 CCDC150Q8NCX0 1101 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 ING5Q8WYH8 240 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 NIF3L1Q9GZT8 377 aa20.61■□□□□ 0.89
SS18-208ENST00000577751 CYP3A43Q9HB55 503 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms