RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 KDELC2Q7Z4H8 507 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 MREGQ8N565 214 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 ING2Q9H160 280 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 RXFP1Q9HBX9 757 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 PCDHA3Q9Y5H8 950 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 MGEA5O60502 916 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 FSBPO95073 299 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 MCF2P10911 925 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 SPRP35270 261 aaPredicted RBP11.38□□□□□ -0.59
RNF43-203ENST00000577716 SULT1E1P49888 294 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 ORC1Q13415 861 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 GPR162Q16538 588 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 AADACL2Q6P093 401 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 SPOCD1Q6ZMY3 1216 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 CD302Q8IX05 232 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 FUKQ8N0W3 1084 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 C4orf32Q8N8J7 132 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
RNF43-203ENST00000577716 CMTM5Q96DZ9 223 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 HPDLQ96IR7 371 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 DCLK3Q9C098 648 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 TAS2R14Q9NYV8 317 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 WARS2Q9UGM6 360 aaKnown RBP11.38□□□□□ -0.59
RNF43-203ENST00000577716 FRMPD4Q14CM0 1322 aa11.38□□□□□ -0.59
RNF43-203ENST00000577716 C3orf70A6NLC5 250 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 ZBBXA8MT70 800 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 IL18RAPO95256 599 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ZBTB7AO95365 584 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ATP6V1G2O95670 118 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ITGB3P05106 788 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 SETSIPP0DME0 302 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 TNFRSF8P28908 595 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 EEF1DP29692 281 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 HSD17B4P51659 736 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 USP10Q14694 798 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 NOP9Q86U38 636 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 TEX9Q8N6V9 391 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 EMC1Q8N766 993 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 PARD3BQ8TEW8 1205 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 PRMT7Q9NVM4 692 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 ATRNO75882 1429 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 RGPD8O14715 1765 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 TMEM150BA6NC51 233 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 MYL3P08590 195 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 ATXN3P54252 364 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 RHBDL3P58872 404 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 NSUN2Q08J23 767 aaKnown RBP eCLIP11.37□□□□□ -0.59
RNF43-203ENST00000577716 ITGB3BPQ13352 177 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 LRRC8EQ6NSJ5 796 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 SYTL5Q8TDW5 730 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 GIPC2Q8TF65 315 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ZNF669Q96BR6 464 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 DEFB129Q9H1M3 183 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 SLC24A2Q9UI40 661 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 CACNA1FO60840 1977 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ASB14A6NK59 587 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 TISP43B9A030 160 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 DNAJC8O75937 253 aaPredicted RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 CRYMQ14894 314 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 EFCAB12Q6NXP0 572 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 CDC26Q8NHZ8 85 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 TMA16Q96EY4 203 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 SH3GL3Q99963 347 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 TASP1Q9H6P5 420 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 DCLRE1BQ9H816 532 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 CHST7Q9NS84 486 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 ZNF263O14978 683 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 POLBP06746 335 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 RARBP10826 455 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 MYL2P10916 166 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 TSPY1Q01534 308 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 MAPRE2Q15555 327 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 KIAA1841Q6NSI8 718 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 IQCKQ8N0W5 287 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 PDCD6IPQ8WUM4 868 aaKnown RBP11.37□□□□□ -0.59
RNF43-203ENST00000577716 IFT43Q96FT9 208 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 CISHQ9NSE2 258 aa11.37□□□□□ -0.59
RNF43-203ENST00000577716 DFFAO00273 331 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 E2F6O75461 281 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 NAMPTP43490 491 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 PPP3CAQ08209 521 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 TRADDQ15628 312 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 DCAF6Q58WW2 860 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 SUGP1Q8IWZ8 645 aaKnown RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 USP33Q8TEY7 942 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
RNF43-203ENST00000577716 NINJ2Q9NZG7 142 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 FMN2Q9NZ56 1722 aa11.36□□□□□ -0.59
RNF43-203ENST00000577716 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms