RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 UACAQ9BZF9 1416 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 PODXLO00592 558 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 TMEM63AO94886 807 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 FSBPO95073 299 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 PRLP01236 227 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 RPLP2P05387 115 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 MYL4P12829 197 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 TYRP14679 529 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 EN2P19622 333 aaPredicted RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 CST5P28325 142 aaPredicted RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 SEC24CP53992 1094 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 CHRNDQ07001 517 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 NEXNQ0ZGT2 675 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 DCTN1Q14203 1278 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 PKN2Q16513 984 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 MUM1L1Q5H9M0 696 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 KANK2Q63ZY3 851 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 RPUSD3Q6P087 351 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 CATSPERGQ6ZRH7 1159 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 Q6ZUG5 572 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 B4GALNT4Q76KP1 1039 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 MIGA2Q7L4E1 593 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 KDELC2Q7Z4H8 507 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 CARNMT1Q8N4J0 409 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 SH2D3CQ8N5H7 860 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 OR2I1PQ8NGU4 316 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 CALML6Q8TD86 181 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 CREB3L4Q8TEY5 395 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 ATP2A3Q93084 1043 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 NSUN4Q96CB9 384 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 IQCDQ96DY2 449 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 CCDC34Q96HJ3 373 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 SUCLG2Q96I99 432 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 FAM167AQ96KS9 214 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 DMRTA2Q96SC8 542 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 TMEM8AQ9HCN3 771 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 KRT84Q9NSB2 600 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 SACM1LQ9NTJ5 587 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 PNPOQ9NVS9 261 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 AFF4Q9UHB7 1163 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 PRSS50Q9UI38 385 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 SCOCQ9UIL1 159 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 ADAM29Q9UKF5 820 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 ZHX1Q9UKY1 873 aaPredicted RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 CDY2AQ9Y6F7 541 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 DUSP10Q9Y6W6 482 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 TDRD9Q8NDG6 1382 aaKnown RBP5.5□□□□□ -1.53
TSR1-203ENST00000575049 AQRO60306 1485 aaKnown RBP eCLIP5.5□□□□□ -1.537e-8■■■■□ 23.7
TSR1-203ENST00000575049 NCAPD3P42695 1498 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
TSR1-203ENST00000575049 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 ZBED9Q6R2W3 1325 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CUX1P39880 1505 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 KDM5BQ9UGL1 1544 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 UBA6A0AVT1 1052 aaPredicted RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 PIP5K1BO14986 540 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CUTAO60888 179 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 APOL3O95236 402 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 PFKMP08237 780 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 PORP16435 677 aaPredicted RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 CNR2P34972 360 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 ADCY8P40145 1251 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 ARF3P61204 181 aaPredicted RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 ARF1P84077 181 aaKnown RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 CD83Q01151 205 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 SLC6A3Q01959 620 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 PPP3CAQ08209 521 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 CUL4BQ13620 913 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 SCARB2Q14108 478 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 SMC1AQ14683 1233 aaKnown RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 UBE3CQ15386 1083 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 UBXN11Q5T124 520 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 FBXO38Q6PIJ6 1188 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 UNQ6494/PRO21346Q6UXR6 183 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 MFSD6Q6ZSS7 791 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 GALNTL5Q7Z4T8 443 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CHD1LQ86WJ1 897 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 REXO1L1PQ8IX06 675 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CEP57L1Q8IYX8 460 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 LGI4Q8N135 537 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 NGEFQ8N5V2 710 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CELF5Q8N6W0 485 aaKnown RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 MSANTD4Q8NCY6 345 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 OR8H1Q8NGG4 311 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 RSAD2Q8WXG1 361 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 NMD3Q96D46 503 aaKnown RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 AJUBAQ96IF1 538 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 SNX22Q96L94 193 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 MRGPRX1Q96LB2 322 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 COG8Q96MW5 612 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 TEPSINQ96N21 525 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 ADI1Q9BV57 179 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 EIF2AQ9BY44 585 aaKnown RBP5.49□□□□□ -1.53
TSR1-203ENST00000575049 KATNBL1Q9H079 304 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 CXorf56Q9H5V9 222 aa5.49□□□□□ -1.53
TSR1-203ENST00000575049 ZWILCHQ9H900 591 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms