RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PHBP35232 272 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CAP2P40123 477 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 RGS2P41220 211 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 IRX4P78413 519 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 TMPRSS15P98073 1019 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CMPK2Q5EBM0 449 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 MOXD1Q6UVY6 613 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 RIPOR1Q6ZS17 1223 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 LZICQ8WZA0 190 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 TTC25Q96NG3 672 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC40-212ENST00000574799 TAS2R1Q9NYW7 299 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ZNF232Q9UNY5 417 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ZMYM2Q9UBW7 1377 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 A8MXQ7 604 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 LPXNO60711 386 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 ASMTLO95671 621 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 CETPP11597 493 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 MAGEA10P43363 369 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 ZNF280AP59817 542 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 GPS1Q13098 491 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 WDR72Q3MJ13 1102 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 RBM44Q6ZP01 1051 aaKnown RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 RINLQ6ZS11 566 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 PYROXD1Q8WU10 500 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 DEFB129Q9H1M3 183 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 C12orf65Q9H3J6 166 aaKnown RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 ZNRF3Q9ULT6 936 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 RSPH10B2B2RC85 870 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 OR6B1O95007 311 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 OATP04181 439 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 RSPH10BP0C881 870 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 MTMR2Q13614 643 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 HIC1Q14526 733 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TRMT5Q32P41 509 aaKnown RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TMEM259Q4ZIN3 620 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 FKBP1CQ5VVH2 108 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 IYDQ6PHW0 289 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 CENPUQ71F23 418 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 OLIG1Q8TAK6 271 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 GATA6Q92908 595 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 EBF3Q9H4W6 596 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 KIAA1586Q9HCI6 787 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 NDUFA13Q9P0J0 144 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 NCANO14594 1321 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 G3V3G9 751 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 RRM1P23921 792 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 GCLMP48507 274 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 LSAMPQ13449 338 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 KCTD21Q4G0X4 260 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 CPNE8Q86YQ8 564 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 OGFOD1Q8N543 542 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 TRIML2Q8N7C3 387 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 OR6Y1Q8NGX8 325 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 SHCBP1LQ9BZQ2 653 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 GRIP2Q9C0E4 1043 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 GINM1Q9NU53 330 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 ARHGEF38Q9NXL2 777 aa10.05□□□□□ -0.8
CCDC40-212ENST00000574799 PSMC3IPQ9P2W1 217 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-212ENST00000574799 A0A1W2PPM1 405 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ZFXP17010 805 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 KCNA1Q09470 495 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CDC16Q13042 620 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 BBS9Q3SYG4 887 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 MFSD4BQ5TF39 518 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 C1orf228Q6PIY5 440 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 B3GNT6Q6ZMB0 384 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 TTC7BQ86TV6 843 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 PRPF39Q86UA1 669 aaKnown RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 STKLD1Q8NE28 680 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 AGBL3Q8NEM8 1001 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 AMNQ9BXJ7 453 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 MYOZ2Q9NPC6 264 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ANLNQ9NQW6 1124 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 THEGQ9P2T0 379 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 TDRKHQ9Y2W6 561 aaKnown RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 RABGAP1Q9Y3P9 1069 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 SGK1O00141 431 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 PLA2G6O60733 806 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ZBTB7AO95365 584 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 STAMBPO95630 424 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ASLP04424 464 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 SPP2Q13103 211 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms