RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 OBP2AQ9NY56 170 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 MAGED2Q9UNF1 606 aaPredicted RBP22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 DCHS1Q96JQ0 3298 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 ZNF233A6NK53 670 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 TNNC2P02585 160 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 ID4P47928 161 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 INTS6LQ5JSJ4 861 aaKnown RBP22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 SDHAF4Q5VUM1 108 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 SHC4Q6S5L8 630 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 CBWD2Q8IUF1 395 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 CXorf38Q8TB03 319 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 BPIFB1Q8TDL5 484 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 SNX21Q969T3 373 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 ACBD6Q9BR61 282 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 IER2Q9BTL4 223 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 SLC46A2Q9BY10 475 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 THG1LQ9NWX6 298 aaKnown RBP22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 GDAP2Q9NXN4 497 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 GTSE1Q9NYZ3 720 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 HSPBP1Q9NZL4 362 aa22.7■■□□□ 1.22
CHRNB1-206ENST00000574054 PTPRJQ12913 1337 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 SPECC1L-ADORA2AF8WAN1 911 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 CHRNB1P11230 501 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 CYP2F1P24903 491 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 WEE1P30291 646 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 MLLT6P55198 1093 aaPredicted RBP22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 NLRP12P59046 1061 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 PLCB2Q00722 1185 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 MYO1EQ12965 1108 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 LRRC32Q14392 662 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 PPP2R5DQ14738 602 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 DDR2Q16832 855 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 FAM26FQ5R3K3 315 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 C1orf228Q6PIY5 440 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 OSTM1Q86WC4 334 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 CMTM8Q8IZV2 173 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 MAB21L3Q8N8X9 362 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 ZBTB44Q8NCP5 570 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 OR5B17Q8NGF7 314 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 RBM12Q9NTZ6 932 aaKnown RBP22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 INTS13Q9NVM9 706 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 NCDNQ9UBB6 729 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 GTF3C4Q9UKN8 822 aa22.69■■□□□ 1.22
CHRNB1-206ENST00000574054 MYBPHLA2RUH7 354 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 EIF3DO15371 548 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CSH1P0DML2 217 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CSH2P0DML3 217 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 HMGA1P17096 107 aaKnown RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 PCSK1P29120 753 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CTHP32929 405 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 HOXD13P35453 343 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 AVPR1AP37288 418 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CCR3P51677 355 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 RPL10AP62906 217 aaKnown RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 TNK2Q07912 1038 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 SURF1Q15526 300 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CCDC142Q17RM4 750 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 TXNDC11Q6PKC3 985 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 TOP6BLQ8N6T0 577 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CELF5Q8N6W0 485 aaKnown RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 HPDLQ96IR7 371 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 FAM126AQ9BYI3 521 aaPredicted RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 ABCB6Q9NP58 842 aa22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 SMG5Q9UPR3 1016 aaKnown RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 NUP210Q8TEM1 1887 aaPredicted RBP22.68■■□□□ 1.22
CHRNB1-206ENST00000574054 CEP250Q9BV73 2442 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 POLR2DO15514 142 aaKnown RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 HCRTO43612 131 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 F11P03951 625 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 ZSCAN22P10073 491 aaPredicted RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 ME1P48163 572 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 LHX1P48742 406 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 NRLP54845 237 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 DUOXA2Q1HG44 320 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 SOWAHAQ2M3V2 549 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 TXNDC8Q6A555 127 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 TMEM150AQ86TG1 271 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 RALGPS2Q86X27 583 aaPredicted RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 SPATA2LQ8IUW3 424 aaPredicted RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 NELFCDQ8IXH7 590 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 RDH13Q8NBN7 331 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 MRPS31Q92665 395 aaKnown RBP22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 NELL1Q92832 810 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 C7orf25Q9BPX7 421 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 KIAA1586Q9HCI6 787 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 ZMYM5Q9UJ78 669 aa22.67■■□□□ 1.22
CHRNB1-206ENST00000574054 DDX6P26196 483 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 CASP1P29466 404 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 CYP2J2P51589 502 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 SATB1Q01826 763 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 PON2Q15165 354 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 ITPRIPL2Q3MIP1 535 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 CNNM4Q6P4Q7 775 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 EPM2AIP1Q7L775 607 aaPredicted RBP22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 SCN4BQ8IWT1 228 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 SPATA18Q8TC71 538 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 PKMYT1Q99640 499 aa22.66■■□□□ 1.22
CHRNB1-206ENST00000574054 MAGEF1Q9HAY2 307 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms