RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 NCANO14594 1321 aa10.74□□□□□ -0.69
RPA1-206ENST00000573994 ANK1P16157 1881 aa10.74□□□□□ -0.69
RPA1-206ENST00000573994 NOTCH4Q99466 2003 aa10.74□□□□□ -0.69
RPA1-206ENST00000573994 PVALEFA0A1B0GWK0 134 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 HUS1O60921 280 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 ECI2O75521 394 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 MICAL2O94851 1124 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 DCNP07585 359 aaKnown RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 ATF6P18850 670 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 CMA1P23946 247 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 VIPR2P41587 438 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 GPR15P49685 360 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 CLCN5P51795 746 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 EPHA5P54756 1037 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 SNRPFP62306 86 aaKnown RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 RBP5P82980 135 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 TSPY1Q01534 308 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 STK4Q13043 487 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 BMT2Q1RMZ1 405 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 KMT5BQ4FZB7 885 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 GPIHBP1Q8IV16 184 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 ADGRF2Q8IZF7 708 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 LEMD2Q8NC56 503 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 KIAA0895Q8NCT3 520 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 ZSCAN18Q8TBC5 510 aaPredicted RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 ATOH1Q92858 354 aaPredicted RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 ASB16Q96NS5 453 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 CGRRF1Q99675 332 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 LRRC3Q9BY71 257 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 KIAA1586Q9HCI6 787 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 DDX43Q9NXZ2 648 aaKnown RBP10.73□□□□□ -0.69
RPA1-206ENST00000573994 SCN1AP35498 2009 aa10.73□□□□□ -0.69
RPA1-206ENST00000573994 USP34Q70CQ2 3546 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 LRRN2O75325 713 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 HAPLN1P10915 354 aaPredicted RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 SYKP43405 635 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 CASP4P49662 377 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 MRE11P49959 708 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 PSMC1P62191 440 aaKnown RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 CYP4F8P98187 520 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 VEPH1Q14D04 833 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 PSMD6Q15008 389 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 MLF2Q15773 248 aaPredicted RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 KNOP1Q1ED39 458 aaKnown RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 DUOXA2Q1HG44 320 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 SDHAF4Q5VUM1 108 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 VITQ6UXI7 678 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 DNAJB7Q7Z6W7 309 aaPredicted RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 WDR49Q8IV35 697 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 CCDC105Q8IYK2 499 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 DCP1BQ8IZD4 617 aaKnown RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 XXYLT1Q8NBI6 393 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 PSMG2Q969U7 264 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 ELSPBP1Q96BH3 223 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 HPDLQ96IR7 371 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 FNBP1Q96RU3 617 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 PI4K2AQ9BTU6 479 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 IL21Q9HBE4 155 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 ZFP14Q9HCL3 533 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 HSFX1Q9UBD0 423 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 USP25Q9UHP3 1055 aa10.72□□□□□ -0.69
RPA1-206ENST00000573994 R3HCC1Q9Y3T6 440 aaKnown RBP10.72□□□□□ -0.69
RPA1-206ENST00000573994 EXOC3O60645 756 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 CLSTN1O94985 981 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 RPN1P04843 607 aaKnown RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 MYL1P05976 194 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TNNI1P19237 187 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 CD72P21854 359 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 GABRR2P28476 465 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 MYL7Q01449 175 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 PFKPQ01813 784 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 SMARCB1Q12824 385 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 MYO1EQ12965 1108 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 BECN1Q14457 450 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 UBXN2BQ14CS0 331 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 SURF1Q15526 300 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 SOWAHAQ2M3V2 549 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 SLC44A4Q53GD3 710 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 GPR158Q5T848 1215 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TPRG1Q6ZUI0 275 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 GAREM2Q75VX8 874 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TRAPPC11Q7Z392 1133 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 ITIH5Q86UX2 942 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TMEM86AQ8N2M4 240 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 TOP6BLQ8N6T0 577 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 DTWD2Q8NBA8 298 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 PJA1Q8NG27 643 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 PLEKHO2Q8TD55 490 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 C2orf15Q8WU43 125 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms