RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZNF268Q14587 947 aaPredicted RBP30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 DCUN1D2Q6PH85 259 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 LPPQ93052 612 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 KRT12Q99456 494 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 ADAM2Q99965 735 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 SNX25Q9H3E2 840 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 SYNCQ9H7C4 482 aa30.81■■■□□ 2.52
CTDNEP1-208ENST00000573600 ARL5CA6NH57 179 aa30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 GNL1P36915 607 aaPredicted RBP30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 ZNF211Q13398 564 aaPredicted RBP30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 PPP2R5EQ16537 467 aa30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 ACOT1Q86TX2 421 aa30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 CPNE8Q86YQ8 564 aa30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 BEGAINQ9BUH8 593 aa30.8■■■□□ 2.52
CTDNEP1-208ENST00000573600 PDCLQ13371 301 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 CYP4A22Q5TCH4 519 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 ARHGAP17Q68EM7 881 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 CRYBG2Q8N1P7 616 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 IPO4Q8TEX9 1081 aaKnown RBP30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 SH3TC2Q8TF17 1288 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 KBTBD7Q8WVZ9 684 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 CPXM1Q96SM3 734 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 RSAD1Q9HA92 442 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 STIM2Q9P246 746 aa30.79■■■□□ 2.52
CTDNEP1-208ENST00000573600 GOLGA6L10A0A0M3HER8 536 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 SIGLEC16A6NMB1 481 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 PSTPIP1O43586 416 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 SETSIPP0DME0 302 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 PSMC1P62191 440 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 MCEEQ96PE7 176 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 AP1M1Q9BXS5 423 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 L1RE1Q9UN81 338 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 NME7Q9Y5B8 376 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 DNM1LO00429 736 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 WARSP23381 471 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 RPL9P32969 192 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 RPL7AP62424 266 aaKnown RBP30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 GOLGA7BQ2TAP0 167 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 PPP1R26Q5T8A7 1209 aaPredicted RBP30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 RHOT1Q8IXI2 618 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 C12orf29Q8N999 325 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 UBA3Q8TBC4 463 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 MIOSQ9NXC5 875 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 HESX1Q9UBX0 185 aa30.78■■■□□ 2.52
CTDNEP1-208ENST00000573600 ATP8B1O43520 1251 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 PIGHQ14442 188 aaPredicted RBP30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 MAP9Q49MG5 647 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 TRAF7Q6Q0C0 670 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 XYLT1Q86Y38 959 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 KLHL7Q8IXQ5 586 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 ADGRF2Q8IZF7 708 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 SLITRK6Q9H5Y7 841 aa30.77■■■□□ 2.52
CTDNEP1-208ENST00000573600 ZRANB2O95218 330 aaKnown RBP eCLIP30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 GJB6O95452 261 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 PYGMP11217 842 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 SCNN1GP51170 649 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 TNIP3Q96KP6 325 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 UNC93B1Q9H1C4 597 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 ZNF446Q9NWS9 450 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 DMGDHQ9UI17 866 aaKnown RBP30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 PTPN22Q9Y2R2 807 aa30.76■■■□□ 2.52
CTDNEP1-208ENST00000573600 ERBB2P04626 1255 aa30.76■■■□□ 2.51
CTDNEP1-208ENST00000573600 KRT3P12035 628 aa30.76■■■□□ 2.51
CTDNEP1-208ENST00000573600 PKDCCQ504Y2 493 aa30.76■■■□□ 2.51
CTDNEP1-208ENST00000573600 NIPA2Q8N8Q9 360 aa30.76■■■□□ 2.51
CTDNEP1-208ENST00000573600 MCRS1Q96EZ8 462 aa30.76■■■□□ 2.51
CTDNEP1-208ENST00000573600 PODXLO00592 558 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 CYB561D2O14569 222 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 FGFR1P11362 822 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 SNX16P57768 344 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 FNIP1Q8TF40 1166 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 HDAC7Q8WUI4 952 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 RGS18Q9NS28 235 aa30.75■■■□□ 2.51
CTDNEP1-208ENST00000573600 GOLGA8SH3BPF8 625 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 CAPN15O75808 1086 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 PFKMP08237 780 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 CDK7P50613 346 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 CCNI2Q6ZMN8 369 aaPredicted RBP30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 ECHDC2Q86YB7 292 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 RNF169Q8NCN4 708 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 CCDC26Q8TAB7 109 aa30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 PAK6Q9NQU5 681 aaPredicted RBP30.74■■■□□ 2.51
CTDNEP1-208ENST00000573600 TDRD15B5MCY1 1934 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 SART1O43290 800 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 TNFRSF8P28908 595 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 SLC7A5Q01650 507 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 GRIK3Q13003 919 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 BEND6Q5SZJ8 279 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 STK32AQ8WU08 396 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 DDX27Q96GQ7 796 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 DPEP3Q9H4B8 488 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 FAM49BQ9NUQ9 324 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 TJP2Q9UDY2 1190 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 USTQ9Y2C2 406 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 SEC31AO94979 1220 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 PDGFRBP09619 1106 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 CLCNKBP51801 687 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 AFF1P51825 1210 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 AADACL2Q6P093 401 aa30.73■■■□□ 2.51
CTDNEP1-208ENST00000573600 TTC30AQ86WT1 665 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms