RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ADAM28Q9UKQ2 775 aa14.52□□□□□ -0.09
CCDC40-209ENST00000573474 CDH9Q9ULB4 789 aa14.52□□□□□ -0.09
CCDC40-209ENST00000573474 TIMM13Q9Y5L4 95 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-209ENST00000573474 LTBP2Q14767 1821 aa14.52□□□□□ -0.09
CCDC40-209ENST00000573474 M0QYV0 167 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 HCRTO43612 131 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 MOCS3O95396 460 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 CYP1A2P05177 515 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 NOP2P46087 812 aaKnown RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 NAP1L1P55209 391 aaKnown RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 BCAR1P56945 870 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 GOLGA7BQ2TAP0 167 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 PPP1R26Q5T8A7 1209 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 OVOS1Q6IE37 1185 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 PSRC1Q6PGN9 363 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 SYT10Q6XYQ8 523 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 MON1BQ7L1V2 547 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ERICH1Q86X53 443 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 RHOT2Q8IXI1 618 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 CMTR2Q8IYT2 770 aaKnown RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 C1orf131Q8NDD1 294 aaKnown RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 RFFLQ8WZ73 363 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ZNF653Q96CK0 615 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ARHGEF26Q96DR7 871 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ABHD8Q96I13 439 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ACBD6Q9BR61 282 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 CWH43Q9H720 699 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 AVENQ9NQS1 362 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-209ENST00000573474 ADAM22Q9P0K1 906 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 HESX1Q9UBX0 185 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 SALL4Q9UJQ4 1053 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 GTF3C4Q9UKN8 822 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
CCDC40-209ENST00000573474 FAM170AA1A519 330 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ZBBXA8MT70 800 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 SYN3O14994 580 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 CAPN15O75808 1086 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 CALB1P05937 261 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 SETSIPP0DME0 302 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 MMP8P22894 467 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 CASQ1P31415 396 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 GPD2P43304 727 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ALDH7A1P49419 539 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ELAVL2Q12926 359 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 FAM117BQ6P1L5 589 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 SLC35F6Q8N357 371 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ANKRD52Q8NB46 1076 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 MSANTD4Q8NCY6 345 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 KIF18AQ8NI77 898 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 UBA3Q8TBC4 463 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 SLC35G2Q8TBE7 412 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ALS2CR12Q96Q35 445 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 WDR24Q96S15 920 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 HNRNPABQ99729 332 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 LPIN3Q9BQK8 851 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 RC3H2Q9HBD1 1191 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 FAM49BQ9NUQ9 324 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 MARCH5Q9NX47 278 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 HCSTQ9UBK5 93 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 CNOT8Q9UFF9 292 aaKnown RBP14.5□□□□□ -0.09
CCDC40-209ENST00000573474 DNAI1Q9UI46 699 aa14.5□□□□□ -0.09
CCDC40-209ENST00000573474 ALPK3Q96L96 1907 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 SF3B1O75533 1304 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 BUB1O43683 1085 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 ATP2C2O75185 946 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 OAZ2O95190 189 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 SYN1P17600 705 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 HADHBP55084 474 aaKnown RBP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 YWHAHQ04917 246 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 PTP4A2Q12974 167 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 BTG3Q14201 252 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 PKDCCQ504Y2 493 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 KIAA0319Q5VV43 1072 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 MMS22LQ6ZRQ5 1243 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 SLC2A14Q8TDB8 520 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 HERVK_113Q902F9 699 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 ZNF592Q92610 1267 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 LBHD1Q9BQE6 289 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-209ENST00000573474 RTP3Q9BQQ7 232 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 C11orf70Q9BRQ4 267 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 CRTAC1Q9NQ79 661 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 CTTNBP2NLQ9P2B4 639 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 PCDH10Q9P2E7 1040 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 UVRAGQ9P2Y5 699 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 CYTH4Q9UIA0 394 aa14.49□□□□□ -0.09
CCDC40-209ENST00000573474 FNDC1Q4ZHG4 1894 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-209ENST00000573474 NT5C1B-RDH14C9J2C7 533 aa14.48□□□□□ -0.09
CCDC40-209ENST00000573474 MTA2O94776 668 aa14.48□□□□□ -0.09
CCDC40-209ENST00000573474 CCDC130P13994 396 aa14.48□□□□□ -0.09
CCDC40-209ENST00000573474 FGFR3P22607 806 aa14.48□□□□□ -0.09
CCDC40-209ENST00000573474 ADORA2BP29275 332 aa14.48□□□□□ -0.09
CCDC40-209ENST00000573474 TKTP29401 623 aaKnown RBP14.48□□□□□ -0.09
CCDC40-209ENST00000573474 BCAT1P54687 386 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms