RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
NUP88-205ENST00000572809 CRELD2Q6UXH1 353 aaPredicted RBP8.05□□□□□ -1.12
NUP88-205ENST00000572809 DSTYKQ6XUX3 929 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 USP37Q86T82 979 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 TMEM130Q8N3G9 435 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 SLC7A14Q8TBB6 771 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 DHX58Q96C10 678 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 MYADMQ96S97 322 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 TSPAN10Q9H1Z9 355 aaPredicted RBP8.05□□□□□ -1.12
NUP88-205ENST00000572809 TMEM206Q9H813 350 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 KBTBD4Q9NVX7 518 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 FBXL5Q9UKA1 691 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 DERAQ9Y315 318 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 TIMM13Q9Y5L4 95 aaPredicted RBP8.05□□□□□ -1.12
NUP88-205ENST00000572809 MYO10Q9HD67 2058 aa8.05□□□□□ -1.12
NUP88-205ENST00000572809 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 A0A1W2PRU2 124 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 ANO9A1A5B4 782 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 PIRO00625 290 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 OAZ2O95190 189 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 IL18RAPO95256 599 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 LRG1P02750 347 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 POU2F2P09086 479 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 PTPN2P17706 415 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 GARTP22102 1010 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.12
NUP88-205ENST00000572809 CASP5P51878 434 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 LILRA4P59901 499 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 NTHL1P78549 312 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 YWHAHQ04917 246 aaPredicted RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 TMEM132DQ14C87 1099 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 C9orf57Q5W0N0 161 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 RESP18Q5W5W9 173 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 TPGS2Q68CL5 300 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 STXBP4Q6ZWJ1 553 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 GET4Q7L5D6 327 aaPredicted RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 SUGP1Q8IWZ8 645 aaKnown RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 TCEAL8Q8IYN2 117 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 Q8N3U1 123 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 SLC44A3Q8N4M1 653 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 RSAD2Q8WXG1 361 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 NXPE3Q969Y0 559 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 SENP8Q96LD8 212 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 FAM213AQ9BRX8 229 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 OXCT2Q9BYC2 517 aaPredicted RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 TRIM9Q9C026 710 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 KCNH6Q9H252 994 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 SMOC2Q9H3U7 446 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 PCIF1Q9H4Z3 704 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 CYP4F11Q9HBI6 524 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 DPP3Q9NY33 737 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 EPS15L1Q9UBC2 864 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 DNMT3BQ9UBC3 853 aaKnown RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 MAFFQ9ULX9 164 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 C2CD2Q9Y426 696 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 ZFP37Q9Y6Q3 630 aaPredicted RBP8.04□□□□□ -1.12
NUP88-205ENST00000572809 C2orf16Q68DN1 1984 aa8.04□□□□□ -1.12
NUP88-205ENST00000572809 TECTAO75443 2155 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ARHGEF37A1IGU5 675 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 PRRG1O14668 218 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 PPEF2O14830 753 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 SEC24AO95486 1093 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 NFICP08651 508 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 CPB1P15086 417 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 TYMPP19971 482 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 AVPR2P30518 371 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 PTGIRP43119 386 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 AFMP43652 599 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ASIC1P78348 528 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ADCY1Q08828 1119 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 PABPC1LQ4VXU2 614 aaKnown RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 CNNM4Q6P4Q7 775 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 LYSMD3Q7Z3D4 306 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 SLC9A9Q8IVB4 645 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ZSWIM2Q8NEG5 633 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ITFG1Q8TB96 612 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 ZNF507Q8TCN5 953 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 NOC3LQ8WTT2 800 aaKnown RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 CACTINQ8WUQ7 758 aaKnown RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 HPS3Q969F9 1004 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 FAM122AQ96E09 287 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 SAAL1Q96ER3 474 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 PYM1Q9BRP8 204 aaKnown RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 FGFBP2Q9BYJ0 223 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 BLZF1Q9H2G9 400 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 MAGEF1Q9HAY2 307 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 HCFC1R1Q9NWW0 138 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 AFF4Q9UHB7 1163 aaKnown RBP8.03□□□□□ -1.12
NUP88-205ENST00000572809 CDH7Q9ULB5 785 aa8.03□□□□□ -1.12
NUP88-205ENST00000572809 KCNH3Q9ULD8 1083 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms