RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 AOPEPQ8N6M6 819 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 CDK19Q9BWU1 502 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 TLR10Q9BXR5 811 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 RHOBTB2Q9BYZ6 727 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 GTPBP4Q9BZE4 634 aaKnown RBP5.14□□□□□ -1.59
NUP88-202ENST00000570937 WDCPQ9H6R7 721 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 UNKLQ9H9P5 680 aaKnown RBP5.14□□□□□ -1.59
NUP88-202ENST00000570937 IP6K2Q9UHH9 426 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 PNMA8BQ9ULN7 279 aaPredicted RBP5.14□□□□□ -1.59
NUP88-202ENST00000570937 MTO1Q9Y2Z2 717 aaKnown RBP5.14□□□□□ -1.59
NUP88-202ENST00000570937 NEU2Q9Y3R4 380 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 MAST3O60307 1309 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 GPRASP1Q5JY77 1395 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 KNDC1Q76NI1 1749 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 KIAA1210Q9ULL0 1709 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 ANKARQ7Z5J8 1434 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 AHDC1Q5TGY3 1603 aaPredicted RBP5.13□□□□□ -1.59
NUP88-202ENST00000570937 LRRC14BA6NHZ5 514 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 AKAP10O43572 662 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 PF4V1P10720 104 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 ITGAMP11215 1152 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 FDXRP22570 491 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 PRDX5P30044 214 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 SEC24CP53992 1094 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 EPHB1P54762 984 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 POU6F2P78424 691 aaPredicted RBP5.13□□□□□ -1.59
NUP88-202ENST00000570937 FSTL1Q12841 308 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 CCDC93Q567U6 631 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 ATAT1Q5SQI0 421 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 ZNF772Q68DY9 489 aaPredicted RBP5.13□□□□□ -1.59
NUP88-202ENST00000570937 KRT28Q7Z3Y7 464 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 TMPRSS9Q7Z410 1059 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 COLGALT2Q8IYK4 626 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 LNX2Q8N448 690 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 NGDNQ8NEJ9 315 aaKnown RBP5.13□□□□□ -1.59
NUP88-202ENST00000570937 SUPT20HQ8NEM7 779 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 TMIEQ8NEW7 156 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 SCAMP4Q969E2 229 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 HPS3Q969F9 1004 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 RGMAQ96B86 450 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 MVB12AQ96EY5 273 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 FAM167AQ96KS9 214 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 VSX1Q9NZR4 365 aaPredicted RBP5.13□□□□□ -1.59
NUP88-202ENST00000570937 CTTNBP2NLQ9P2B4 639 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 SLC45A2Q9UMX9 530 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 PHLPP1O60346 1717 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 NALCNQ8IZF0 1738 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 EVC2Q86UK5 1308 aa5.13□□□□□ -1.59
NUP88-202ENST00000570937 PRSS29PA6NIE9 313 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 ESRRBO95718 433 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 FTLP02792 175 aaPredicted RBP5.12□□□□□ -1.59
NUP88-202ENST00000570937 KCNA2P16389 499 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 SMARCA1P28370 1054 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 ADRA1BP35368 520 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 MAP2K6P52564 334 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 INHBEP58166 350 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 ZNF844Q08AG5 666 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 FOXI1Q12951 378 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 NBPF8Q3BBV2 869 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 HEATR3Q7Z4Q2 680 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 CFAP52Q8N1V2 620 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 SLC9A6Q92581 669 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 DDX17Q92841 729 aaKnown RBP5.12□□□□□ -1.59
NUP88-202ENST00000570937 AIFM3Q96NN9 605 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 CDH19Q9H159 772 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 SLC12A5Q9H2X9 1139 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 KMT5AQ9NQR1 393 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 TBCCD1Q9NVR7 557 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 PCDHA3Q9Y5H8 950 aa5.12□□□□□ -1.59
NUP88-202ENST00000570937 PRAMEF33A0A0G2JMD5 474 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 E7ENX8 843 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 E9PLN8 166 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 PRAMEF10O60809 474 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 RFPL1O75677 317 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 LMNAP02545 664 aaKnown RBP5.11□□□□□ -1.59
NUP88-202ENST00000570937 GNAI3P08754 354 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 TYRP14679 529 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 TYRP1P17643 537 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 MPLP40238 635 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 PIK3CGP48736 1102 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 RAB27AP51159 221 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 GNAI1P63096 354 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 TAP2Q03519 686 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 PIGFQ07326 219 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 MPP3Q13368 585 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 KIF22Q14807 665 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 SMN1Q16637 294 aaKnown RBP5.11□□□□□ -1.59
NUP88-202ENST00000570937 GEN1Q17RS7 908 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.11□□□□□ -1.59
NUP88-202ENST00000570937 CLNKQ7Z7G1 428 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 PDPRQ8NCN5 879 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 SLC17A8Q8NDX2 589 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 GPR150Q8NGU9 434 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 CAVIN3Q969G5 261 aa5.11□□□□□ -1.59
NUP88-202ENST00000570937 Q96MF0 132 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms