RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 LMBRD2Q68DH5 695 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 VITQ6UXI7 678 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 NELFCDQ8IXH7 590 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZNF507Q8TCN5 953 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 E2F7Q96AV8 911 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 BCO2Q9BYV7 579 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 LTB4R2Q9NPC1 389 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 HEBP1Q9NRV9 189 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 AGPAT3Q9NRZ7 376 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 INTS13Q9NVM9 706 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 DLGAP2Q9P1A6 1054 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 SIX4Q9UIU6 781 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 L1RE1Q9UN81 338 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 PCDHB5Q9Y5E4 795 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 NOTCH4Q99466 2003 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 TSC2P49815 1807 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 PVALEFA0A1B0GWK0 134 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 LRRN2O75325 713 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 GLULP15104 373 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 CD72P21854 359 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 CASP1P29466 404 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 CDC25CP30307 473 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 CYP2J2P51589 502 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 SNRPFP62306 86 aaKnown RBP13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 STXBP5Q5T5C0 1151 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZNF852Q6ZMS4 543 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 WDR49Q8IV35 697 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 YAF2Q8IY57 180 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 ADGRF2Q8IZF7 708 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 TOP6BLQ8N6T0 577 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 NKD2Q969F2 451 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 NELL2Q99435 816 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 GDAP2Q9NXN4 497 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 DDX43Q9NXZ2 648 aaKnown RBP13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 PTPRJQ12913 1337 aa13.28□□□□□ -0.28
CTDNEP1-205ENST00000570828 PRR23AA6NEV1 266 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 HEPACAM2A8MVW5 462 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 DPYSL4O14531 572 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZNF263O14978 683 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 NCAM2O15394 837 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 TGFB1I1O43294 461 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 SLFN14P0C7P3 912 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 PCSK1P29120 753 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAGEA9P43362 315 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 LHX1P48742 406 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 KRT85P78386 507 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 KCNC4Q03721 635 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 EHHADHQ08426 723 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 CUL4BQ13620 913 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 INTS6LQ5JSJ4 861 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZC3H14Q6PJT7 736 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 MFSD6LQ8IWD5 586 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 GRAMD1CQ8IYS0 662 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 XXYLT1Q8NBI6 393 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 RDH13Q8NBN7 331 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 OR5B17Q8NGF7 314 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 GIPC2Q8TF65 315 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 LEO1Q8WVC0 666 aaPredicted RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 HPDLQ96IR7 371 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 SLC39A2Q9NP94 309 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 EXOC1Q9NV70 894 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 MYH15Q9Y2K3 1946 aa13.27□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAN2B1O00754 1011 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 NCANO14594 1321 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 CLIC2O15247 247 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 TNNI1P19237 187 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 CYP4F8P98187 520 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 BMT2Q1RMZ1 405 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 ASCL5Q7RTU5 278 aa13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 ARID3BQ8IVW6 561 aaPredicted RBP13.26□□□□□ -0.29
CTDNEP1-205ENST00000570828 GOLGA5Q8TBA6 731 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms