RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ERCC5P28715 1186 aaPredicted RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 ASPAP45381 313 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 FMO5P49326 533 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 TUFMP49411 452 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 SMARCB1Q12824 385 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 ORC1Q13415 861 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 RBM43Q6ZSC3 357 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 RTL10Q7L3V2 364 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 SCN4BQ8IWT1 228 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 GIPC2Q8TF65 315 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 ING5Q8WYH8 240 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 SDCBP2Q9H190 292 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 APOBEC3GQ9HC16 384 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 BRWD1Q9NSI6 2320 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 MYBPHLA2RUH7 354 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 DLL1O00548 723 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 AFPP02771 609 aaKnown RBP13.67□□□□□ -0.22
CDT1-203ENST00000569140 RHOP08100 348 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 CYP2F1P24903 491 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 GPR15P49685 360 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 KCNH2Q12809 1159 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
CDT1-203ENST00000569140 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 GPR152Q8TDT2 470 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 RHOBTB2Q9BYZ6 727 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 THAP9Q9H5L6 903 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 CRTAC1Q9NQ79 661 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
CDT1-203ENST00000569140 MRPS23Q9Y3D9 190 aaKnown RBP13.67□□□□□ -0.22
CDT1-203ENST00000569140 DENND4AQ7Z401 1863 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 PTPN1P18031 435 aaKnown RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 BDNFP23560 247 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 ANXA13P27216 316 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 NDST1P52848 882 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 TYRO3Q06418 890 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 ITIH5Q86UX2 942 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 STKLD1Q8NE28 680 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 TNIP3Q96KP6 325 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 MED15Q96RN5 788 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 DNAJC25Q9H1X3 360 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 CEP72Q9P209 647 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 MAGED2Q9UNF1 606 aaPredicted RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
CDT1-203ENST00000569140 SPTBN5Q9NRC6 3674 aaKnown RBP13.66□□□□□ -0.22
CDT1-203ENST00000569140 ATP8B3O60423 1300 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 POU2F2P09086 479 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 ATF6P18850 670 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 GRIK1P39086 918 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
CDT1-203ENST00000569140 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
CDT1-203ENST00000569140 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 DDR2Q16832 855 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 KLHL40Q2TBA0 621 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 ZNF394Q53GI3 561 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 FAM171BQ6P995 826 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 ST13P5Q8NFI4 369 aaPredicted RBP13.65□□□□□ -0.22
CDT1-203ENST00000569140 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 MYCBPAPQ8TBZ2 947 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 TATDN2Q93075 761 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 PCED1BQ96HM7 432 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 NT5C1BQ96P26 610 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 PKMYT1Q99640 499 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 ARID3AQ99856 593 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 BCO2Q9BYV7 579 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 CYP3A43Q9HB55 503 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 GCNT4Q9P109 453 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 HSFX1Q9UBD0 423 aa13.65□□□□□ -0.22
CDT1-203ENST00000569140 CLDN5O00501 218 aa13.64□□□□□ -0.23
CDT1-203ENST00000569140 ZNF197O14709 1029 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms