RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 CEP57L1Q8IYX8 460 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 MAML2Q8IZL2 1156 aaPredicted RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 THEM5Q8N1Q8 247 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 STKLD1Q8NE28 680 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 DEPDC1BQ8WUY9 529 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 HPDLQ96IR7 371 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 ANKRD36BP1Q96IX9 119 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 XYLT2Q9H1B5 865 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 ZFP14Q9HCL3 533 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 ABCB6Q9NP58 842 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 CRTAC1Q9NQ79 661 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 TRPV5Q9NQA5 729 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 HEBP1Q9NRV9 189 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 EXOC1Q9NV70 894 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 DDX43Q9NXZ2 648 aaKnown RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 USP25Q9UHP3 1055 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 MTF2Q9Y483 593 aaPredicted RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 ANAPC1Q9H1A4 1944 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 GVINP1Q7Z2Y8 2422 aa8.4□□□□□ -1.07
CDH3-209ENST00000569080 CACNA1IQ9P0X4 2223 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 KANSL1LA0AUZ9 987 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 MYBPHLA2RUH7 354 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 LRRIQ3A6PVS8 624 aaPredicted RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 HEPACAM2A8MVW5 462 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 HUS1O60921 280 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 ATP2C2O75185 946 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 NOL4O94818 638 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 RHOBTB3O94955 611 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 CST3P01034 146 aaPredicted RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 TNNC2P02585 160 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 RPN1P04843 607 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 PSMC3P17980 439 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 WARSP23381 471 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 LMO2P25791 158 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 WEE1P30291 646 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 PSMC1P62191 440 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 CYP4F8P98187 520 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 TSPY1Q01534 308 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 ZCWPW2Q504Y3 356 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 SLC44A4Q53GD3 710 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 C1orf220Q5T0J3 134 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 TDRD10Q5VZ19 366 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 FAM171BQ6P995 826 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 TPRG1Q6ZUI0 275 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 ITIH5Q86UX2 942 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 FSIP1Q8NA03 581 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 RIN3Q8TB24 985 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 GIPC2Q8TF65 315 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 FUBP3Q96I24 572 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDH3-209ENST00000569080 MRPL45Q9BRJ2 306 aaKnown RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 PI4K2AQ9BTU6 479 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 OSBPL6Q9BZF3 934 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 GPR88Q9GZN0 384 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 SCAND2PQ9GZW5 306 aaPredicted RBP8.39□□□□□ -1.07
CDH3-209ENST00000569080 IRF2BPLQ9H1B7 796 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 VRTNQ9H8Y1 702 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 GTF3C4Q9UKN8 822 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 SIT1Q9Y3P8 196 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
CDH3-209ENST00000569080 EXOC3O60645 756 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 TACC1O75410 805 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 VNN1O95497 513 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 FGF19O95750 216 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 F11P03951 625 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 NR3C1P04150 777 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 TNNI1P19237 187 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 CD72P21854 359 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 CYP2F1P24903 491 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 PCSK1P29120 753 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 CDC25CP30307 473 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 GDI1P31150 447 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MAGEA11P43364 429 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 LHX1P48742 406 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 NLRP12P59046 1061 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MYL6P60660 151 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 DLG4P78352 724 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MYL7Q01449 175 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 MYO1EQ12965 1108 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 PSMD2Q13200 908 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 VEPH1Q14D04 833 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 GPR158Q5T848 1215 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 SDHAF4Q5VUM1 108 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ASCL5Q7RTU5 278 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 ARID3BQ8IVW6 561 aaPredicted RBP8.38□□□□□ -1.07
CDH3-209ENST00000569080 MFSD6LQ8IWD5 586 aa8.38□□□□□ -1.07
CDH3-209ENST00000569080 GOLGA5Q8TBA6 731 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms