RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
VPS9D1-207ENST00000568691 A0A087X0B3 334 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 SYN3O14994 580 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 N4BP3O15049 544 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 DGAT1O75907 488 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 LYPLA2O95372 231 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 STAT6P42226 847 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 RARRES1P49788 294 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 ANO6Q4KMQ2 910 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 CTXN3Q4LDR2 81 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 HYIQ5T013 277 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 ELMOD1Q8N336 334 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 BPIFB1Q8TDL5 484 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 DHX58Q96C10 678 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 UROC1Q96N76 676 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 HSD17B14Q9BPX1 270 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 GKN1Q9NS71 199 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 EVLQ9UI08 416 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 MBD1Q9UIS9 605 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 ZNF462Q96JM2 2506 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 PLXNB3Q9ULL4 1909 aa12.92□□□□□ -0.34
VPS9D1-207ENST00000568691 GON4LQ3T8J9 2241 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 UPK3BL1B0FP48 263 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 UPK3BL2E5RIL1 263 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 PODXLO00592 558 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 ATG13O75143 517 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 APBB3O95704 486 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 ARSAP15289 507 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 WEE1P30291 646 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 GBP1P32455 592 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 MAPK8P45983 427 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 GALK1P51570 392 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 NLRP12P59046 1061 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 DMC1Q14565 340 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 MAEAQ7L5Y9 396 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 PDILTQ8N807 584 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 GLIS3Q8NEA6 775 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 RPLP0P6Q8NHW5 317 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 MDM1Q8TC05 714 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 IL21Q9HBE4 155 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 LRWD1Q9UFC0 647 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 NUP210Q8TEM1 1887 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-207ENST00000568691 ACKR2O00590 384 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 MARCH6O60337 910 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 SOAT2O75908 522 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 HNRNPLP14866 589 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 ENGP17813 658 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 TXKP42681 527 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 ZNF165P49910 485 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 CYP4F8P98187 520 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 PNOCQ13519 176 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 PRPF4BQ13523 1007 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 TRIM61Q5EBN2 209 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 GPR158Q5T848 1215 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 KRT79Q5XKE5 535 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 RASSF3Q86WH2 238 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 FRMD1Q8N878 549 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 RASSF8Q8NHQ8 419 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 PIGKQ92643 395 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 EIF2AK1Q9BQI3 630 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 MAFFQ9ULX9 164 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms