RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	KLHL5	Q96PQ7	755 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	TWNK	Q96RR1	684 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	GAS2L1	Q99501	681 aa	Predicted RBP	12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	CLSTN3	Q9BQT9	956 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	ELOVL4	Q9GZR5	314 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	PRDM12	Q9H4Q4	367 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	NSUN3	Q9H649	340 aa	Known RBP	12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	ABCB6	Q9NP58	842 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	HSFX1	Q9UBD0	423 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	HMGXB4	Q9UGU5	601 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	DPP7	Q9UHL4	492 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	NME7	Q9Y5B8	376 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	CDH23	Q9H251	3354 aa		12.78	□□□□□ -0.36
FANCA-231	ENST00000568626	GOLGA6L6	A8MZA4	724 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	ADCY5	O95622	1261 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	GLUD1	P00367	558 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	GYPC	P04921	128 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	PDGFRB	P09619	1106 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	VDR	P11473	427 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	FER	P16591	822 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	PTPN1	P18031	435 aa	Known RBP	12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	USP8	P40818	1118 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	PSMC1	P62191	440 aa	Known RBP	12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	ZBED6	P86452	979 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	PTPN21	Q16825	1174 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	CFAP221	Q4G0U5	840 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	SGO2	Q562F6	1265 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	FAM171B	Q6P995	826 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	RTL10	Q7L3V2	364 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	TMC6	Q7Z403	805 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	ACOT1	Q86TX2	421 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	CNGA4	Q8IV77	575 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	SLC4A11	Q8NBS3	891 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	ZNF461	Q8TAF7	563 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	SPPL2B	Q8TCT7	592 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	BAP1	Q92560	729 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	PKMYT1	Q99640	499 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	GPR88	Q9GZN0	384 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	DPEP3	Q9H4B8	488 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	TLE6	Q9H808	572 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	CRTAC1	Q9NQ79	661 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	AFF4	Q9UHB7	1163 aa	Known RBP	12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	CAPN11	Q9UMQ6	739 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	LUC7L2	Q9Y383	392 aa	Known RBP	12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	CUL9	Q8IWT3	2517 aa		12.77	□□□□□ -0.37
FANCA-231	ENST00000568626	WDR27	A2RRH5	827 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	RFXAP	O00287	272 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	FOXN3	O00409	490 aa	Predicted RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	MED7	O43513	233 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	HCRT	O43612	131 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	ABLIM3	O94929	683 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	CSPG5	O95196	566 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	SRGAP2B	P0DMP2	458 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	CD19	P15391	556 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	RPL17	P18621	184 aa	Known RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	KLRC2	P26717	231 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	GNA15	P30679	374 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	PDE6C	P51160	858 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	ARPP19	P56211	112 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	PTK2	Q05397	1052 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	MEA1	Q16626	185 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	DUSP6	Q16828	381 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	SLC39A12	Q504Y0	691 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	ZNF394	Q53GI3	561 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	MDH1B	Q5I0G3	518 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	ARHGAP17	Q68EM7	881 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	HDAC7	Q8WUI4	952 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	SYN2	Q92777	582 aa	Predicted RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	MYLPF	Q96A32	169 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	HEXIM2	Q96MH2	286 aa	Known RBP	12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	GTF3C4	Q9UKN8	822 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	PCDHB5	Q9Y5E4	795 aa		12.76	□□□□□ -0.37
FANCA-231	ENST00000568626	MYBPHL	A2RUH7	354 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	MTMR11	A4FU01	709 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	LRRC53	A6NM62	1247 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	CYP26A1	O43174	497 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	ADAM12	O43184	909 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	NCK2	O43639	380 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	MFAP3L	O75121	409 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	CLASP2	O75122	1294 aa	Known RBP	12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	OR4Q2	P0C623	313 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	ATF2	P15336	505 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	CASP14	P31944	242 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	ELF1	P32519	619 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	CYP27A1	Q02318	531 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	TBX2	Q13207	712 aa	Predicted RBP	12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	PLD1	Q13393	1074 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	ORC1	Q13415	861 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	LIN9	Q5TKA1	542 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	SFMBT2	Q5VUG0	894 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	VSTM1	Q6UX27	236 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	ZNF677	Q86XU0	584 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	DRC7	Q8IY82	874 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	SMARCD1	Q96GM5	515 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	PCED1B	Q96HM7	432 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	TMEM209	Q96SK2	561 aa		12.75	□□□□□ -0.37
FANCA-231	ENST00000568626	HNRNPAB	Q99729	332 aa	Known RBP	12.75	□□□□□ -0.37

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