RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 LMNB2Q03252 620 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 TFDP3Q5H9I0 405 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 GPAT2Q6NUI2 795 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 LONP2Q86WA8 852 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 KIAA0319LQ8IZA0 1049 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 RDM1Q8NG50 284 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 RFWD2Q8NHY2 731 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 DEPTORQ8TB45 409 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 ACTL9Q8TC94 416 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 PTPRN2Q92932 1015 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 PRR11Q96HE9 360 aaPredicted RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 CGRRF1Q99675 332 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 A0A0B4J269 797 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 ENTPD5O75356 428 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 OTUD4Q01804 1114 aaKnown RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 ORC1Q13415 861 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 HIF1AQ16665 826 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 DRICH1Q6PGQ1 229 aaPredicted RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 CENPUQ71F23 418 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 MTDHQ86UE4 582 aaKnown RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 RHPN2Q8IUC4 686 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 CPT1BQ92523 772 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 TTC25Q96NG3 672 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 MAP3K20Q9NYL2 800 aaKnown RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 PSMC3IPQ9P2W1 217 aaPredicted RBP19.28■□□□□ 0.68
PKD1-235ENST00000568591 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
PKD1-235ENST00000568591 C3orf70A6NLC5 250 aaPredicted RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 RFC1P35251 1148 aaPredicted RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 SLC8A3P57103 927 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 TAF5Q15542 800 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 FLAD1Q8NFF5 587 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 JOSD2Q8TAC2 188 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 CYLDQ9NQC7 956 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 SMG5Q9UPR3 1016 aaKnown RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 FARP1Q9Y4F1 1045 aaPredicted RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 MYH9P35579 1960 aaKnown RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 RGPD3A6NKT7 1758 aaPredicted RBP19.27■□□□□ 0.68
PKD1-235ENST00000568591 RGPD4Q7Z3J3 1758 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 PLSCR1O15162 318 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 TMEM63AO94886 807 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 CETN2P41208 172 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 NR1H3Q13133 447 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 TRIM68Q6AZZ1 485 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 NLRP9Q7RTR0 991 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 CCDC125Q86Z20 511 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 ZNF276Q8N554 614 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 EMC1Q8N766 993 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 UBR7Q8N806 425 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 SLC35B2Q8TB61 432 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 TCP10LQ8TDR4 215 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
PKD1-235ENST00000568591 ADGRA2Q96PE1 1338 aa19.27■□□□□ 0.67
PKD1-235ENST00000568591 C2orf71A6NGG8 1288 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 CXCL9Q07325 125 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 EFHC2Q5JST6 749 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 PPP1R15BQ5SWA1 713 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 RFWD3Q6PCD5 774 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 RGS9BPQ6ZS82 235 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 C3orf62Q6ZUJ4 267 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 ZBED3Q96IU2 234 aaPredicted RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 RAB3IPQ96QF0 476 aaPredicted RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 PAFAH2Q99487 392 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 MIPEPQ99797 713 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 PORCNQ9H237 461 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 SLC24A3Q9HC58 644 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 CISHQ9NSE2 258 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 ITGAVP06756 1048 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 GEMIN4P57678 1058 aaKnown RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 XKR3Q5GH77 459 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 PRAMEF18Q5VWM3 479 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 IGDCC3Q8IVU1 814 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 FBXO36Q8NEA4 188 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 PYROXD1Q8WU10 500 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 NKD2Q969F2 451 aaPredicted RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 ZNF668Q96K58 619 aaPredicted RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 DENND2DQ9H6A0 471 aaPredicted RBP19.26■□□□□ 0.67
PKD1-235ENST00000568591 PCDH9Q9HC56 1237 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 CYTH4Q9UIA0 394 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 SHOC2Q9UQ13 582 aa19.26■□□□□ 0.67
PKD1-235ENST00000568591 CST8O60676 142 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 NEBLO76041 1014 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 GNAZP19086 355 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 TBXAS1P24557 533 aaPredicted RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 TGFB2P61812 414 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 SUPT20HL1Q3ZLR7 823 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 UNC45BQ8IWX7 931 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 NSUN6Q8TEA1 469 aaKnown RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 MZB1Q8WU39 189 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 RNPEPL1Q9HAU8 725 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 AGTPBP1Q9UPW5 1226 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 DRG1Q9Y295 367 aaKnown RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 ASS1P00966 412 aaKnown RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 RPL22P35268 128 aaKnown RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 MCL1Q07820 350 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 TAF11Q15544 211 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 CTC1Q2NKJ3 1217 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 PARP6Q2NL67 630 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms