RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TMEM9BQ9NQ34 198 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 TBX20Q9UMR3 447 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 FREM2Q5SZK8 3169 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
GTF3C1-209ENST00000568569 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 PIRO00625 290 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 CYB561D2O14569 222 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 PIGRP01833 764 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 F11P03951 625 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 NFICP08651 508 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 HMGA1P17096 107 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 SPINK2P20155 84 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 CSRP1P21291 193 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 SCP2P22307 547 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 U2AF2P26368 475 aaKnown RBP eCLIP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 DGKEP52429 567 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 MTF1Q14872 753 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 TMEM132DQ14C87 1099 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 ACAP1Q15027 740 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 USP39Q53GS9 565 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 MON1AQ86VX9 555 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 TSTD1Q8NFU3 115 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 DMXL2Q8TDJ6 3036 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 CD101Q93033 1021 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 MSTO1Q9BUK6 570 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 ECT2Q9H8V3 914 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 DERAQ9Y315 318 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
GTF3C1-209ENST00000568569 A0A0B4J269 797 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CSH1P0DML2 217 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CSH2P0DML3 217 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 TAF6P49848 677 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 TOB1P50616 345 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 PSMD2Q13200 908 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 IL17AQ16552 155 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 HYIQ5T013 277 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CYP2U1Q7Z449 544 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 EZH1Q92800 747 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 GATA6Q92908 595 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 DUS2Q9NX74 493 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CPSF3Q9UKF6 684 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 C2CD2Q9Y426 696 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 PCDHB5Q9Y5E4 795 aa12.74□□□□□ -0.37
GTF3C1-209ENST00000568569 CDX4O14627 284 aaPredicted RBP12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 IFNAR2P48551 515 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 ZNF77Q15935 545 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 SCNM1Q9BWG6 230 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 ASB7Q9H672 318 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 TMEM206Q9H813 350 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 MAGED2Q9UNF1 606 aaPredicted RBP12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 INVSQ9Y283 1065 aa12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
GTF3C1-209ENST00000568569 TRAV19A0A0A6YYK7 116 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 K7ENM7 598 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TADA3O75528 432 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TOP3BO95985 862 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 CKMP06732 381 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TSPY1Q01534 308 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 LMAN2Q12907 356 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 USP4Q13107 963 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 NR1H3Q13133 447 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 RASSF3Q86WH2 238 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 ZCCHC14Q8WYQ9 949 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 CNOT6LQ96LI5 555 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TPSD1Q9BZJ3 242 aa12.72□□□□□ -0.37
GTF3C1-209ENST00000568569 TRPC7Q9HCX4 862 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms