RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 IER2Q9BTL4 223 aa20.32■□□□□ 0.84
SPSB3-210ENST00000568416 C8orf33Q9H7E9 229 aaPredicted RBP20.32■□□□□ 0.84
SPSB3-210ENST00000568416 LMAN1LQ9HAT1 526 aa20.32■□□□□ 0.84
SPSB3-210ENST00000568416 MAGEF1Q9HAY2 307 aa20.32■□□□□ 0.84
SPSB3-210ENST00000568416 KIAA1586Q9HCI6 787 aa20.32■□□□□ 0.84
SPSB3-210ENST00000568416 TGFB1I1O43294 461 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
SPSB3-210ENST00000568416 SOX9P48436 509 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 NLRP12P59046 1061 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 SOWAHAQ2M3V2 549 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
SPSB3-210ENST00000568416 C1orf228Q6PIY5 440 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 TSSK4Q6SA08 328 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
SPSB3-210ENST00000568416 UNC13DQ70J99 1090 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 LIMS2Q7Z4I7 341 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 ADGRF2Q8IZF7 708 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 ABCB6Q9NP58 842 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 ZSCAN32Q9NX65 697 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 GTF3C4Q9UKN8 822 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 PCDHA7Q9UN72 937 aa20.31■□□□□ 0.84
SPSB3-210ENST00000568416 DMDP11532 3685 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 TICRRQ7Z2Z1 1910 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 SLC38A8A6NNN8 435 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 POLR2DO15514 142 aaKnown RBP20.3■□□□□ 0.84
SPSB3-210ENST00000568416 HCRTO43612 131 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 LILRB5O75023 590 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 TNNC2P02585 160 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 CSH1P0DML2 217 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 CSH2P0DML3 217 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 TDGF1P13385 188 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 LHX1P48742 406 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
SPSB3-210ENST00000568416 DUOXA2Q1HG44 320 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 DPH6Q7L8W6 267 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 WDR49Q8IV35 697 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 ZFYVE19Q96K21 471 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 AGPAT3Q9NRZ7 376 aa20.3■□□□□ 0.84
SPSB3-210ENST00000568416 UBE4BO95155 1302 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 SOBPA7XYQ1 873 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 SPECC1L-ADORA2AF8WAN1 911 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CYP2F1P24903 491 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 DDX6P26196 483 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 PCSK1P29120 753 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CASP1P29466 404 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 RPL10AP62906 217 aaKnown RBP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 MYO1EQ12965 1108 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 DDR2Q16832 855 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CCDC142Q17RM4 750 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CFAP221Q4G0U5 840 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 WDR44Q5JSH3 913 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 SDHAF4Q5VUM1 108 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 RESP18Q5W5W9 173 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 ATL3Q6DD88 541 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 RALGPS2Q86X27 583 aaPredicted RBP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CMTM8Q8IZV2 173 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 CELF5Q8N6W0 485 aaKnown RBP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 SCFD1Q8WVM8 642 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 KBTBD7Q8WVZ9 684 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 ATRIPQ8WXE1 791 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 RUBCNQ92622 972 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 HPDLQ96IR7 371 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 FAM126AQ9BYI3 521 aaPredicted RBP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 SMG9Q9H0W8 520 aaKnown RBP20.29■□□□□ 0.84
SPSB3-210ENST00000568416 BLZF1Q9H2G9 400 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 GTSE1Q9NYZ3 720 aa20.29■□□□□ 0.84
SPSB3-210ENST00000568416 NOL4O94818 638 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 CTHP32929 405 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 ME1P48163 572 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 PKP1Q13835 747 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 GAS6Q14393 721 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 SNRNP35Q16560 246 aaKnown RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 FAM171BQ6P995 826 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 TXNDC11Q6PKC3 985 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 TTC8Q8TAM2 541 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 FUBP3Q96I24 572 aaKnown RBP eCLIP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
SPSB3-210ENST00000568416 MAGED2Q9UNF1 606 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 NUP210Q8TEM1 1887 aaPredicted RBP20.28■□□□□ 0.84
SPSB3-210ENST00000568416 TCHHQ07283 1943 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 PVALEFA0A1B0GWK0 134 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 CLIC2O15247 247 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 TADA3O75528 432 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 CCR3P51677 355 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 TNK2Q07912 1038 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 LRRC32Q14392 662 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 PSMD6Q15008 389 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 TRAPPC11Q7Z392 1133 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 MON1AQ86VX9 555 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 SPATA2LQ8IUW3 424 aaPredicted RBP20.27■□□□□ 0.84
SPSB3-210ENST00000568416 NELFCDQ8IXH7 590 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 MAB21L3Q8N8X9 362 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms