RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 GAP43P17677 238 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 PSMC3P17980 439 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 PLCG1P19174 1290 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TYMPP19971 482 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 MPSTP25325 297 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 LRPAP1P30533 357 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 GGCXP38435 758 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 MAPK8P45983 427 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TUFMP49411 452 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 NRLP54845 237 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 LILRA4P59901 499 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 GTF2BQ00403 316 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 FOXK2Q01167 660 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 POU5F1Q01860 360 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 CEBPZQ03701 1054 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 SMARCB1Q12824 385 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 GPR17Q13304 367 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 MYBPC2Q14324 1141 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 VEPH1Q14D04 833 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 PTPAQ15257 358 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TANGO2Q6ICL3 276 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 JADE1Q6IE81 842 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 C1orf228Q6PIY5 440 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 RNF19BQ6ZMZ0 732 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 CCDC73Q6ZRK6 1079 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TPRG1Q6ZUI0 275 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 STXBP4Q6ZWJ1 553 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 DYMQ7RTS9 669 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ASCL5Q7RTU5 278 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 DEPDC1BQ8WUY9 529 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 POMGNT1Q8WZA1 660 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 DNASE1L2Q92874 299 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 SMARCD2Q92925 531 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 PGLYRP2Q96PD5 576 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 GCNAQ96QF7 691 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ACCSQ96QU6 501 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 SPOCK3Q9BQ16 436 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 FOXQ1Q9C009 403 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 CCSER1Q9C0I3 900 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ZSCAN16Q9H4T2 348 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ASB7Q9H672 318 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 THG1LQ9NWX6 298 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 DPP3Q9NY33 737 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 SIRPGQ9P1W8 387 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 STK17AQ9UEE5 414 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TUBGCP4Q9UGJ1 667 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 AGO2Q9UKV8 859 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ASB3Q9Y575 518 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 PCDHGB7Q9Y5F8 929 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 TIMM13Q9Y5L4 95 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 RIF1Q5UIP0 2472 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 MYH10P35580 1976 aa5.04□□□□□ -1.6
HERPUD1-213ENST00000568358 ATG2BQ96BY7 2078 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 HMGB1P1B2RPK0 211 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CYB561D2O14569 222 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 KLF4O43474 513 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 GCNT3O95395 438 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SEC24AO95486 1093 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PIGRP01833 764 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 HSP90AA1P07900 732 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SP9P0CG40 484 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 IDEP14735 1019 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 GLULP15104 373 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CEBPBP17676 345 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 IGFBP6P24592 240 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 NMT1P30419 496 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 GDI1P31150 447 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PNPLA4P41247 253 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 TNFSF9P41273 254 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 STAT6P42226 847 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 RPS9P46781 194 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ACOT2P49753 483 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 TAF6P49848 677 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 KPNA1P52294 538 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF131P52739 623 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CSTF1Q05048 431 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PTK2Q05397 1052 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 DUSP4Q13115 394 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 CBLBQ13191 982 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ALCAMQ13740 583 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZBTB6Q15916 424 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC5A9Q2M3M2 681 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF528Q3MIS6 628 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SV2CQ496J9 727 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZC2HC1CQ53FD0 456 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 PRSS36Q5K4E3 855 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 SPATA1Q5VX52 437 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 C9orf57Q5W0N0 161 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ALKBH2Q6NS38 261 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF720Q7Z2F6 126 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 DNAJB7Q7Z6W7 309 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 MAP4K3Q8IVH8 894 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 MFSD6LQ8IWD5 586 aa5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 DCP1BQ8IZD4 617 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 GPR161Q8N6U8 529 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-213ENST00000568358 ZSCAN18Q8TBC5 510 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms