RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KBTBD13C9JR72 458 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 SART1O43290 800 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 MGEA5O60502 916 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PROSCO94903 275 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 HEXIM1O94992 359 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 TUBBP07437 444 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 KRT3P12035 628 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 MCM3P25205 808 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 LMO2P25791 158 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CTNNA1P35221 906 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 PNPLA4P41247 253 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 TNNT3P45378 269 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 LILRA4P59901 499 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 GOLGA7BQ2TAP0 167 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 SV2CQ496J9 727 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 RASGEF1CQ8N431 466 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 TTC39CQ8N584 583 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 IPO4Q8TEX9 1081 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 LHX5Q9H2C1 402 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 TSPYL2Q9H2G4 693 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 STIM2Q9P246 746 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 HESX1Q9UBX0 185 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 AMACRQ9UHK6 382 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 STRIP2Q9ULQ0 834 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 NR2E1Q9Y466 385 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PCDHA3Q9Y5H8 950 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 ARL5CA6NH57 179 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 RAD51CO43502 376 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CKBP12277 381 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 IGFBP6P24592 240 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 ADORA2BP29275 332 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 SLC1A1P43005 524 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PEX5P50542 639 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CLCNKBP51801 687 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 WDR93Q6P2C0 686 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 AGMOQ6ZNB7 445 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 EMC1Q8N766 993 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CD101Q93033 1021 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 EPB41L5Q9HCM4 733 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 ERVK-5Q9HDB9 667 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 KLHL11Q9NVR0 708 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 MIOSQ9NXC5 875 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 L1RE1Q9UN81 338 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 F8VP50 259 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CYB561D2O14569 222 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 GRAP2O75791 330 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 ERBB2P04626 1255 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 GLI1P08151 1106 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 FGFR1P11362 822 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 CCDC130P13994 396 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 ACAT1P24752 427 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 CDH5P33151 784 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 RFC1P35251 1148 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 GPD2P43304 727 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PDCLQ13371 301 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 SMC1AQ14683 1233 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 XKR4Q5GH76 650 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 FAM102AQ5T9C2 384 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 OR6B2Q6IFH4 312 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 RPAINQ86UA6 219 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 ADGRF2Q8IZF7 708 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 C3orf20Q8ND61 904 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 GSTCDQ8NEC7 633 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PPP1R10Q96QC0 940 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMG1-215ENST00000568239 UNC93B1Q9H1C4 597 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 RSAD1Q9HA92 442 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 METTL5Q9NRN9 209 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 SLC38A7Q9NVC3 462 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 KIAA1257Q9ULG3 409 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 NME7Q9Y5B8 376 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.21
SMG1-215ENST00000568239 TMEM191CA6NGB0 347 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 CCDC188H7C350 402 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 TULP2O00295 520 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 MYBL2P10244 700 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 CYP3A5P20815 502 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 PSMA2P25787 234 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 TAS2R40P59535 323 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 HLTFQ14527 1009 aaKnown RBP eCLIP7.46□□□□□ -1.21
SMG1-215ENST00000568239 MAP9Q49MG5 647 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 GLE1Q53GS7 698 aaKnown RBP7.46□□□□□ -1.21
SMG1-215ENST00000568239 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.21
SMG1-215ENST00000568239 LCLAT1Q6UWP7 414 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 DSTYKQ6XUX3 929 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 RHOT1Q8IXI2 618 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 HASPINQ8TF76 798 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 PAAF1Q9BRP4 392 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 HEMGNQ9BXL5 484 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 TRIM31Q9BZY9 425 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 MIS12Q9H081 205 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.21
SMG1-215ENST00000568239 A0A0U1RQF3 1178 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 TCRBV7S2A1N4TA0A589 114 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 E5RJQ4 531 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms