RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 GET4Q7L5D6 327 aaPredicted RBP10.48□□□□□ -0.73
CLK3-220ENST00000567992 TMC8Q8IU68 726 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 IRF2BP1Q8IU81 584 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 RNF135Q8IUD6 432 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 TRIM59Q8IWR1 403 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 ZDHHC14Q8IZN3 488 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 TDRD5Q8NAT2 981 aaKnown RBP10.48□□□□□ -0.73
CLK3-220ENST00000567992 ITFG1Q8TB96 612 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 SPPL2BQ8TCT7 592 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 MYLPFQ96A32 169 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 LPIN3Q9BQK8 851 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
CLK3-220ENST00000567992 METTL14Q9HCE5 456 aaKnown RBP10.48□□□□□ -0.73
CLK3-220ENST00000567992 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLK3-220ENST00000567992 ABI2Q9NYB9 513 aaPredicted RBP10.48□□□□□ -0.73
CLK3-220ENST00000567992 EPS15L1Q9UBC2 864 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 GTF3C4Q9UKN8 822 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 CDH9Q9ULB4 789 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 NR2E1Q9Y466 385 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 DENND4CQ5VZ89 1909 aa10.48□□□□□ -0.73
CLK3-220ENST00000567992 PMM2O15305 246 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 STX10O60499 249 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 RHOP08100 348 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 PDGFRBP09619 1106 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 CEBPBP17676 345 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 FSHRP23945 695 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 GNL1P36915 607 aaPredicted RBP10.47□□□□□ -0.73
CLK3-220ENST00000567992 FMO5P49326 533 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 GPR15P49685 360 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 INCA1Q0VD86 236 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 PLD1Q13393 1074 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 CFAP221Q4G0U5 840 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 TCERG1LQ5VWI1 586 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 OTOP3Q7RTS5 596 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 FBXL13Q8NEE6 735 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 OR6B3Q8NGW1 331 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 MYCBPAPQ8TBZ2 947 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 TCEAL4Q96EI5 215 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 PCED1BQ96HM7 432 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 FUBP3Q96I24 572 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLK3-220ENST00000567992 TWNKQ96RR1 684 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
CLK3-220ENST00000567992 CORO1BQ9BR76 489 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 NIF3L1Q9GZT8 377 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 ZNF334Q9HCZ1 680 aaPredicted RBP10.47□□□□□ -0.73
CLK3-220ENST00000567992 ABCB6Q9NP58 842 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 RAB20Q9NX57 234 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 TMEM63CQ9P1W3 806 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 PCDHB5Q9Y5E4 795 aa10.47□□□□□ -0.73
CLK3-220ENST00000567992 NUP210Q8TEM1 1887 aaPredicted RBP10.47□□□□□ -0.73
CLK3-220ENST00000567992 GNA14O95837 355 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 PTPN2P17706 415 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 CYP2F1P24903 491 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 ERCC5P28715 1186 aaPredicted RBP10.46□□□□□ -0.73
CLK3-220ENST00000567992 TUFMP49411 452 aaKnown RBP10.46□□□□□ -0.73
CLK3-220ENST00000567992 ORC1Q13415 861 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 MGAT5BQ3V5L5 792 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 CCDC183Q5T5S1 534 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 B3GALNT2Q8NCR0 500 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 STKLD1Q8NE28 680 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 WHAMMQ8TF30 809 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 FGF13Q92913 245 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 PSMG2Q969U7 264 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 CNOT6LQ96LI5 555 aaKnown RBP10.46□□□□□ -0.73
CLK3-220ENST00000567992 ARID3AQ99856 593 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 SNX25Q9H3E2 840 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 IL21Q9HBE4 155 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 TMEM30AQ9NV96 361 aa10.46□□□□□ -0.73
CLK3-220ENST00000567992 MYO10Q9HD67 2058 aa10.46□□□□□ -0.74
CLK3-220ENST00000567992 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 A8MXQ7 604 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ANHXE9PGG2 379 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 PI4K2BG5E9Z4 385 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 CILPO75339 1184 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 MICAL2O94851 1124 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 CLSTN1O94985 981 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ASGR2P07307 311 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 LAMP2P13473 410 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 P4HA1P13674 534 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 PTPN1P18031 435 aaKnown RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 GBP2P32456 591 aaPredicted RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 MAGEA11P43364 429 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ALDH1A3P47895 512 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 NDST1P52848 882 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 CACNA2D1P54289 1103 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 EPHB3P54753 998 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 HTR4Q13639 388 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 SDHAF4Q5VUM1 108 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 C4orf50Q6ZRC1 276 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 C11orf57Q6ZUT1 292 aaPredicted RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 DNAJB7Q7Z6W7 309 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms