RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 EAF1Q96JC9 268 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 FAM167AQ96KS9 214 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 WDR24Q96S15 920 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 TARS2Q9BW92 718 aaKnown RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM117Q9H0C3 514 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 AZI2Q9H6S1 392 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 NHEJ1Q9H9Q4 299 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 C17orf75Q9HAS0 396 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 LZTFL1Q9NQ48 299 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 C1GALT1Q9NS00 363 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 NRBP2Q9NSY0 501 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GCNT4Q9P109 453 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PRKAG2Q9UGJ0 569 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GJD2Q9UKL4 321 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GTPBP10A4D1E9 387 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 FAM170BA6NMN3 283 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ABLIM1O14639 778 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 HNRNPDLO14979 420 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ZSCAN12O43309 604 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 NRDCO43847 1150 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ADCY3O60266 1144 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 FAM189A1O60320 539 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 GREM1O60565 184 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 MSCO60682 206 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 PIGRP01833 764 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 IQCF3P0C7M6 154 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 INSRRP14616 1297 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 UCHL3P15374 230 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 TCF3P15923 654 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 TNFSF9P41273 254 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 KIF11P52732 1056 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CDK17Q00537 523 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CYP27A1Q02318 531 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 GFPT1Q06210 699 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CYP24A1Q07973 514 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 LAMTOR4Q0VGL1 99 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 RAPGEF1Q13905 1077 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 MAP7Q14244 749 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 PPP2R5AQ15172 486 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 SNRNP35Q16560 246 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 EXOC3L4Q17RC7 722 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 DUSP28Q4G0W2 176 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 EPC2Q52LR7 807 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 LMBRD2Q68DH5 695 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CDCA2Q69YH5 1023 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 SEZ6L2Q6UXD5 910 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CACNA2D4Q7Z3S7 1137 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 IRF2BP2Q7Z5L9 587 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 PPTC7Q8NI37 304 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 DEPTORQ8TB45 409 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 POMGNT1Q8WZA1 660 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 KAT5Q92993 513 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 IFT74Q96LB3 600 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 PPP1R16BQ96T49 567 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 DPH2Q9BQC3 489 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 EDEM3Q9BZQ6 932 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 INTS2Q9H0H0 1204 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ACBD3Q9H3P7 528 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ABHD16BQ9H3Z7 469 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 SMARCAD1Q9H4L7 1026 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 MINDY3Q9H8M7 445 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ZCCHC17Q9NP64 241 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 PLCB1Q9NQ66 1216 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 DNAI1Q9UI46 699 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 ABT1Q9ULW3 272 aaKnown RBP6.2□□□□□ -1.42
SF3B3-210ENST00000567654 GABRQQ9UN88 632 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 FRMD4BQ9Y2L6 1034 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 STYXL1Q9Y6J8 313 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 TSC2P49815 1807 aa6.2□□□□□ -1.42
SF3B3-210ENST00000567654 UQCRHLA0A096LP55 91 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 FAM170AA1A519 330 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MYADML2A6NDP7 307 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MAPK13O15264 365 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 MEFVO15553 781 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 B4GALT5O43286 388 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 HBP1O60381 514 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 ADAM23O75077 832 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 CSDE1O75534 798 aaKnown RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 LEFTY1O75610 366 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 LCA5LO95447 670 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 TBC1D8O95759 1140 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 TFRCP02786 760 aaKnown RBP6.19□□□□□ -1.42
SF3B3-210ENST00000567654 VTNP04004 478 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 F13BP05160 661 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 PGRP06401 933 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 UQCRHP07919 91 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 HOXC6P09630 235 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 SRGAP2CP0DJJ0 459 aa6.19□□□□□ -1.42
SF3B3-210ENST00000567654 HARSP12081 509 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms