RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ACACBO00763 2458 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 GCNT3O95395 438 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 CSH1P0DML2 217 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 CSH2P0DML3 217 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 HOXA6P31267 233 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 AMPD2Q01433 879 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 MYL7Q01449 175 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
TSR3-202ENST00000566296 CSRP2Q16527 193 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 CC2D1AQ6P1N0 951 aaPredicted RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 WDR5BQ86VZ2 330 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 MAB21L3Q8N8X9 362 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 CACTINQ8WUQ7 758 aaKnown RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 LEO1Q8WVC0 666 aaPredicted RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 EPSTI1Q96J88 318 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 FAM213AQ9BRX8 229 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 PI4K2AQ9BTU6 479 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 GKN1Q9NS71 199 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 MAGED2Q9UNF1 606 aaPredicted RBP17.78■□□□□ 0.44
TSR3-202ENST00000566296 ATG2BQ96BY7 2078 aa17.78■□□□□ 0.44
TSR3-202ENST00000566296 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 SOBPA7XYQ1 873 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 SLC30A4O14863 429 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 HUS1O60921 280 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 LDHAP00338 332 aaKnown RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 ITGB3P05106 788 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 PDCP20941 246 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 ADSSP30520 456 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 RPL10AP62906 217 aaKnown RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 ALCAMQ13740 583 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 RUNX3Q13761 415 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 SV2BQ7L1I2 683 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 SYCP3Q8IZU3 236 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 FAM160A2Q8N612 972 aaPredicted RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 EXOC4Q96A65 974 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 SAAL1Q96ER3 474 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 IKZF4Q9H2S9 585 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 C2orf42Q9NWW7 574 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 RBAKQ9NYW8 714 aaPredicted RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 AGAP1Q9UPQ3 857 aa17.77■□□□□ 0.44
TSR3-202ENST00000566296 CNOT1A5YKK6 2376 aaKnown RBP17.77■□□□□ 0.44
TSR3-202ENST00000566296 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 ATG13O75143 517 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 F11P03951 625 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 HMGA1P17096 107 aaKnown RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 GPR15P49685 360 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 USP49Q70CQ1 688 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 TMEM150AQ86TG1 271 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 TMEM86AQ8N2M4 240 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 PDCL2Q8N4E4 241 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 SPATA18Q8TC71 538 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 USP13Q92995 863 aaPredicted RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 FAM83CQ9BQN1 747 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 ACBD6Q9BR61 282 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 EBF3Q9H4W6 596 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 HPS4Q9NQG7 708 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 TDP1Q9NUW8 608 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 TMLHEQ9NVH6 421 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 DDX43Q9NXZ2 648 aaKnown RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 FBXO2Q9UK22 296 aaPredicted RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 ITGA11Q9UKX5 1188 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 L1RE1Q9UN81 338 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 SLC8A2Q9UPR5 921 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 CCL26Q9Y258 94 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 R3HCC1Q9Y3T6 440 aaKnown RBP17.76■□□□□ 0.43
TSR3-202ENST00000566296 PCDHB13Q9Y5F0 798 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
TSR3-202ENST00000566296 MYMKA6NI61 221 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 EXTL3O43909 919 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 KRT19P08727 400 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 TMEM191BP0C7N4 346 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 IDEP14735 1019 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 GARTP22102 1010 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 KCNA1Q09470 495 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 ZNF268Q14587 947 aaPredicted RBP17.75■□□□□ 0.43
TSR3-202ENST00000566296 PDGFRLQ15198 375 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 TMEM196Q5HYL7 178 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 TXNDC8Q6A555 127 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 TRIM68Q6AZZ1 485 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 MON1AQ86VX9 555 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 C1orf127Q8N9H9 656 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 STKLD1Q8NE28 680 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 STRA6Q9BX79 667 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 SRPRBQ9Y5M8 271 aaKnown RBP17.75■□□□□ 0.43
TSR3-202ENST00000566296 EPG5Q9HCE0 2579 aa17.75■□□□□ 0.43
TSR3-202ENST00000566296 CCDC163A0A0D9SF12 145 aa17.74■□□□□ 0.43
TSR3-202ENST00000566296 TRDMT1O14717 391 aaKnown RBP17.74■□□□□ 0.43
TSR3-202ENST00000566296 RPP40O75818 363 aaKnown RBP17.74■□□□□ 0.43
TSR3-202ENST00000566296 NOL4O94818 638 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms